Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1289 ATGGAAATGCCTGGTAGAAGATCCAACTACACACTCTTGAATCAAATTCCCGACGATCACTACGGTGGTGGAGCCGTGTCGTCCGGCACAGCTGCCACGTCATCGTTGTTCGGTTCTTCATCTGGTGATGGAAAGAATATTAAAGGAAGGTTGGACAGAGGTTTTGATTGGGACTTGAGTACTGATCATAGGGTGACTCAGCATGGGAATCGGATCGGAAGTTTGTTTCCGTCGATCGGGTTGCAGAGACAGTCTAGTGAGAGCAGTTTTGGTGAAAGCTCGCTATCAGGGGATTATTATGCTCCGACTTTATCTACTGCAGCTGCGAATGAGGTTGATGCCTTTGGGTGTATGCATGATGATGGAGTTAGGGCCGATTTGTTAAGGCCGAAGTTGACGGAAACTGCGGTGCGATCAGGTGGGTCGTTTTCGGGGAAAAGTTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCTAGCTTTGGCGGTTCGCCTTTCATCTGATGCCACTTGTGCTGATGATCCCAATTTTCTGGATCCAATCCCTGATGAATCTGGTTTAAGGTCGTCATCGGCGAGCTCTCCGGAGGCTTTGTCACATAGATTCTGGGTTAATGGCTGCCTATCATATTCCAACAAAATTCTCGATGGCTTTTACTTAGTTCATGGGATGGATTCCTATGTGTGGACTATGTGCACTGATCTGCTGGAAAATGGTCGCATTCCATCTGTTGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAGCATAGTGATCCCAGCTTAAAGGAATTGCAAAACAGAGCGCATAGTATTTCTGGTAGCTGTACAACCTCTAAAGGGGTTGTTGACCAGCTTGCCAAGCTGGTTTGCAACCAAATGGGGGGCTCAGCATCTGTTGGGGAGGATGACCTTCTTTCTATTTGGCGGGAGTGCAGTAATGATCTTAAAGATTGCTTAGGATCTGTTATTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGCAGACATCGTGCTACATTATTCAAAGTATTAGCTGACTCCATTGATTTACCATGTCGGATTGCAAAGGGCTGTAAATATTGCTCTAGAGATGATGCCTCCTCTTGCCTCGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTAGGAAACCAGGTTACTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTCCTTCACCCTTGTGCTTTCCAAGACTTAAACCGGCTGAACCTACAATTGATTTCAGGTCACTGGCCAAACAGTATTTCGCTGATTGTCAGTCCCTTGAGCTTGCTTTTGACAATAATTCTGCAGAACAGTGCGATTGGAAGTGCAGGGACAGAAATAACCCTAGGTCAAATTCAAAGGAAAGCAGCAGAACAAAAGATCAAGGTTCTGAAGCATTTAATTCATGTAAACCTTCCCAGAAGATTGCAGACTCTACGACTTTGGGCAAGGCTCCACTGCCTATAAATCATAACCTACCTGTTGGCCATAGAGATATTATGAAGCCTTTGGTATTTACAAATCCAAATGTAGATGCTATTGAGGGTAGGCGGTTTGCTGATGGAAGCCAACTGGTTCCTAGTAAACCTAACATAGAATTAGGCCTTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGCGAATAGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGATCGGAGGTTGCTGTTAAAATTCTGATGGAACAGGATTTTCTCGCTGAACGTTTCAAGGAATTTTTGAGGGAGGTTGCAATAATGAAGAGGTTGAGGCATCCAAACATTGTTTTATTTATGGGGGCAGTCACCCAACCTCCAAACTTGTCAATTGTCACAGAATACTTATCAAGGGGAAGCTTGTACAGATTGTTGCATAAACCTGGTGCCAAAGAGATGTTGGGTGAAAGGGTTAGACTCAGTATGGCTTATGATGTGGCAAAGGGTATGAATTATCTTCATAAACGCAACCCACCTATTGTTCATAGAGATTTGAAGTCCCCAAATCTTCTTGTTGACAAGAAATATACTGTTAAGGTCTGTGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTCTCATCAAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTACGTGATGAGCCATCAAATGAGAAGTCAGATGTTTATAGCTTTGGTGTAATCTTGTGGGAGCTTGCAACATTGCAACAGCCCTGGGGTAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACGAGATTTGAATCCTCAAGTAGCTGCAATAATAGAGGCTTGCTGGGCCAATGAGCCCTGGAAGCGTCCTTCGTTTGAAAGTATCATGGATTCTTTGAAATCATTGATCAAACCCCCCACACCTACACCTCAACCTGGCCGTCCACCATTACTTTCCTGA 2532 0.4471 MEMPGRRSNYTLLNQIPDDHYGGGAVSSGTAATSSLFGSSSGDGKNIKGRLDRGFDWDLSTDHRVTQHGNRIGSLFPSIGLQRQSSESSFGESSLSGDYYAPTLSTAAANEVDAFGCMHDDGVRADLLRPKLTETAVRSGGSFSGKSWAQQTEESYQLQLALAVRLSSDATCADDPNFLDPIPDESGLRSSSASSPEALSHRFWVNGCLSYSNKILDGFYLVHGMDSYVWTMCTDLLENGRIPSVESLKSVDPCADSSLEVVLVDQHSDPSLKELQNRAHSISGSCTTSKGVVDQLAKLVCNQMGGSASVGEDDLLSIWRECSNDLKDCLGSVIVPIGSLSVGLCRHRATLFKVLADSIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIRKPGYLWEPDSLLNGPSSISFPSPLCFPRLKPAEPTIDFRSLAKQYFADCQSLELAFDNNSAEQCDWKCRDRNNPRSNSKESSRTKDQGSEAFNSCKPSQKIADSTTLGKAPLPINHNLPVGHRDIMKPLVFTNPNVDAIEGRRFADGSQLVPSKPNIELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFLAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLGERVRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKGKRPEIPRDLNPQVAAIIEACWANEPWKRPSFESIMDSLKSLIKPPTPTPQPGRPPLLS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1289 843 CDD STKc_MAP3K-like 575 823 - -
Mibi02g1289 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Mibi02g1289 843 ProSiteProfiles Protein kinase domain profile. 569 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1289 843 Gene3D Transferase(Phosphotransferase) domain 1 648 832 - -
Mibi02g1289 843 PRINTS Tyrosine kinase catalytic domain signature 731 741 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 PRINTS Tyrosine kinase catalytic domain signature 794 816 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 PRINTS Tyrosine kinase catalytic domain signature 750 772 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 PRINTS Tyrosine kinase catalytic domain signature 684 702 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 PRINTS Tyrosine kinase catalytic domain signature 643 656 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 MobiDBLite consensus disorder prediction 465 482 - -
Mibi02g1289 843 Gene3D Phosphorylase Kinase; domain 1 562 647 - -
Mibi02g1289 843 SMART serkin_6 569 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1289 843 Pfam Ethylene-responsive protein kinase Le-CTR1 197 401 - -
Mibi02g1289 843 MobiDBLite consensus disorder prediction 465 493 - -
Mibi02g1289 843 FunFam Serine/threonine-protein kinase CTR1 648 833 - -
Mibi02g1289 843 Pfam Protein tyrosine and serine/threonine kinase 570 823 IPR001245 GO:0004672|GO:0006468
Mibi02g1289 843 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 174 826 - -
Mibi02g1289 843 SUPERFAMILY Protein kinase-like (PK-like) 555 822 IPR011009 -
Mibi02g1289 843 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Mibi02g1289 843 FunFam Serine/threonine-protein kinase isoform 1 559 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1289 Mibi-ChrMibi02 12774364 12781199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1289 1 835 MAP Kinase Kinase Kinase AT5G03730 66.471 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi02g1289 PK_Tyr_Ser-Thr 1.2e-69 CL0016