Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1287 ATGGAACACAGGCCAACCCCACCTTCAAATCCAATTGCCAATGGACTCTTACTCTACTCCTACAACAACAACAAGAAGAAGAAGGGTGAACCGAATTCTCCCAAGAGGTCAAAGGATAAATCTTTGGAGCAGGAAACAACATGTGGGTTCTCTCCCATGTTGAGTTCTGCTGGTTTATCAATGGAGGACATTGGCCTCTCTGGCATTCCTCCTTCGTCTTTGTATGATTCCCCTTTCATGGAATTTAGGGAATTCTCAACTATGAGCTCGACATCTCTGGCTTCACCTCCTTCTCTTGTTCCTGTTAGTGATGAGAGAGCTTCTTTGGTGCCAACAACTGTTAAGGAGGAGGTAGGATTAATGGAAACAAGAGGTGAGTTGGAGGATGTTGATTTGCCTCACCCACTTGGGTGTTTACAGGAGAATCCGATTCCTCCATTTCTATGGAAAACTTACGACCTGGTGGATGATCCATCTCTGGATCCTATTATATCTTGGGGCTCGGCTGGTGCTAGTTTCGTTGTATGGGACCCTGTGGAATTTGCAAGGATCGTCTTGCCAAGGAATTTCAAGCATAACAATTTCTCCAGTTTTATCCGCCAGCTAAATACTTATGTGGGTATTGCTTTAACACAGCCTGGAAAGGCTGCTGTGATCTCTAGGATTGAGAGATTGGCGACTGAAGGAATATTTGGCCTGCAGAGTTTCTTCTATTGCAAGGATGTTTATCTTGAGCACTTTGTATCCCAAGTTTCGATGGGGAATTTGCAATTCTTCTCTTTTGTCATTTTTATCCAGGGGTTCCGCAAGATTGACCCTGATAAGTGGGAGTTTGCGAATGAAGGTTTCAAGCGAGGGAAGAGACATCTACTGAAGAACATACAAAGGCGCAGAACACTGCAATGCCAGCATGCTGGTAATGCTGGGCCATCCACTGAAGCGGGGAAGTCTGGAGTTGAGGTCGAGGTAGAAAGACTGAGAAAGGAAAGAAGTATGTTAGTCCAAGATTTGGTTGATTTGCAGCAACAACAGAGAAGGACTGTTCATCAAGCAGGACAAGTGAACCAGAGGATTGAGTCTGCAGAGCAGAAACAGAAACAAATGGTTTCTTTCTTGGCCAAGTTATTTCAAAATCCAGCATTTTTAGCCCGCCTGAAACAACAGAAGGAACCCAGAGGTATAGGTTCCCCAAGAGTGAGAAGGAATTTTGTCAAGCAGCACCCACATGAAACAGGAGCATCAGACTCTTTGAATGAAGGGCAGATTGTAAAGTACCAACCTGATTGGAGAGACATTACCAACCCTTCGGAAACACCAGTACTACATCCAATTTCTACTGAACGTTCTTCTGAGTACCCTTCACTGAGTTGGGCAAGGGAAGATGGCTCGGTAGCAGAAAATCCGTACGGACAAGCTGATGTTGTATCAGATGAATTGGCTGCAGCTAGTGAAATGATGGCAGCTCCAGGAATCATAGGAGAAGGATCGTCAAGCTTACAGCTTGAAGATCATCTTTGGAAGGGAAAGAATGTAATGAGACCAGATCAAGAAGTTATCCCGGAGGATCTTACCAGGGAGAAAAGTTTTTCGATGTTTTACCCGCCTGAAGCTGAAAGTGTTATTAATCAAGTTCAAGATGTATGGAACCCAGGCTTTAATGTTAGCGGTGCTACTTCTAGCTCTGTGAATGAGCTTTGGGACAGTCCAATTCCAGTGAATTATGAAATGCCAGATTTTGGGGTGACAGGTGGCATGTCAGACCTCTGGGATATAAGCTATATGCAGGAAACAGGAAACTCAGGCCTAGATGACGATAAGTGGCCAACTGATGAGTTCCCTGCAAATGAAACAGAAGGTCAGGCTGATCGCCCAAAAGATGATAGATCTAGGAATGTCGATCCATAG 1905 0.4462 MEHRPTPPSNPIANGLLLYSYNNNKKKKGEPNSPKRSKDKSLEQETTCGFSPMLSSAGLSMEDIGLSGIPPSSLYDSPFMEFREFSTMSSTSLASPPSLVPVSDERASLVPTTVKEEVGLMETRGELEDVDLPHPLGCLQENPIPPFLWKTYDLVDDPSLDPIISWGSAGASFVVWDPVEFARIVLPRNFKHNNFSSFIRQLNTYVGIALTQPGKAAVISRIERLATEGIFGLQSFFYCKDVYLEHFVSQVSMGNLQFFSFVIFIQGFRKIDPDKWEFANEGFKRGKRHLLKNIQRRRTLQCQHAGNAGPSTEAGKSGVEVEVERLRKERSMLVQDLVDLQQQQRRTVHQAGQVNQRIESAEQKQKQMVSFLAKLFQNPAFLARLKQQKEPRGIGSPRVRRNFVKQHPHETGASDSLNEGQIVKYQPDWRDITNPSETPVLHPISTERSSEYPSLSWAREDGSVAENPYGQADVVSDELAAASEMMAAPGIIGEGSSSLQLEDHLWKGKNVMRPDQEVIPEDLTREKSFSMFYPPEAESVINQVQDVWNPGFNVSGATSSSVNELWDSPIPVNYEMPDFGVTGGMSDLWDISYMQETGNSGLDDDKWPTDEFPANETEGQADRPKDDRSRNVDP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1287 634 MobiDBLite consensus disorder prediction 1 45 - -
Mibi02g1287 634 MobiDBLite consensus disorder prediction 603 634 - -
Mibi02g1287 634 SMART hsfneu3 143 297 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1287 634 PRINTS Heat shock factor (HSF) domain signature 147 170 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1287 634 PRINTS Heat shock factor (HSF) domain signature 198 210 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1287 634 PRINTS Heat shock factor (HSF) domain signature 185 197 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1287 634 FunFam Heat stress transcription factor B-4 139 216 - -
Mibi02g1287 634 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 135 415 IPR027725 -
Mibi02g1287 634 Pfam HSF-type DNA-binding 147 297 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1287 634 MobiDBLite consensus disorder prediction 595 634 - -
Mibi02g1287 634 MobiDBLite consensus disorder prediction 13 27 - -
Mibi02g1287 634 MobiDBLite consensus disorder prediction 28 43 - -
Mibi02g1287 634 SUPERFAMILY "Winged helix" DNA-binding domain 145 205 IPR036390 -
Mibi02g1287 634 Gene3D - 139 298 IPR036388 -
Mibi02g1287 634 Coils Coil 323 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1287 Mibi-ChrMibi02 12756975 12759723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1287 258 632 HSF AT5G03720 34.646 6.17e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi02g1287 HSF_DNA-bind 5.8e-26 CL0123