Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1285 ATGGACATGGATAGCTCGCGTAGACCATTCGATAGATCTCGAGAGCCTGGTATGAAGAAACCTCGACTGACCGACGAGCTCGAGCGCGGTTCAAATCCTAGTCTCCGACCGTTTCCTCAGCGACAAGTGGCTTCTGGAGTTAATTCCTTAACCCAGACAAGGTTTAGAACAAACGACAGAGATTCCGAAAGTGGTGAAGCTGGTCGCGGTGGATACCAGCCCCAACCGCTCCATCAAGAGCTTGTTAATCAGTACAAAACCGCACTTGCTGAGCTGACATTCAATTCGAAGCCAATAATCACCAACTTGACTATAATTGCAGGCGAGAATCTTTATGCCGCGAAGGCAATTGCTGCCACTGTTTGTGCTAACATTCTAGAGGTTCCCACTGAACAAAAGCTGCCATCTCTTTATCTTTTAGACAGTATTGTTAAGAATATTGGGCGGGACTATATAAAGTACTTTGCTGCTAGACTACCTGAGGTATTCTGCAAGGCATACAGACAGGTTGATTCTTCTGTCCATTCAAGCATGAGGCACCTTTTTGGAACTTGGAAAGGAGTCTTTCCATCCCAGACCCTCCAGATGATTGAGAAGGATCTTTGCTTCACTCCTGCTGTCAATGGTTCATCTTCTGCATCTGCACTGAGGAGTGATTCACAGTCACAACGACCACAGCATAGTATCCACGTGAATCCTAAATATTTGGAGAGGCAGCGTCTTCAGCAGTCTGGCAGGATTAAAGGAACAAATGATATTGCTGGAACTACTACAAACTCTAGTGATGGTGCAGAAAGGCCAGATAGAGCATTAGGTGCTGCTCGACCATGGATGGATTCCAGTGCTAACATGCATAACATTCAGGGCTCTAATAGAGATCCATATAATGATTCTGTTCCTGATAAGGGCATTGGTACATCCTATGGAGGCGAGGAATATGGTTCTGATCTTTCAAGGAACTCAGGTTTGGGTATTGGAGGAGCTGGTGGCAGGACTTCTGAGTTAGCACGTGACAAAGCTTGGTACAAAGCAGGCAGCAATGCTGCAGACATGATGTCTGTCCAAAGGAATGGTTTCAGTCTAAAGCGTAGCTTATCAAATCATGAAGCACCAAAGTCCACCAACTTGGATGAACAAAATCAGCCTACACGAAGCTTAGCTAGCATAAAGAGTAATCTCTTGTCTAGTAGCTGGAAAAATTCTGAGGAAGAGGAGTACATGTGGGATGAGGTGAGCGCTGGAATGACTGAGCATGGTGCATCTAATGTCTCTAGCAACTTGGGCAAAGATTGTTGGACTGCTGATGACGACAATTTGGCAGTTGAAGGTCACCTTCAAAACACGTTCCGTGAAGATAGAAATGTAACCACTGAAATGAAACGCCTACCTGCTTTTGGTCATCGGCCATCATTATCTTGGAAATCACAGCAGCAGCAGCCTTTTGATGAGCTGAATAATAGGCCATATCCTTCAGAAGGCATTGGATCCACTCTTGGTAGGTTGCCAAACACTGTGAATTCTTCTAATGTCAAAATTGGAAATCGGCCTTTCTTGTCAAATGCCGCATTAGGATCGTTAGGAACAGTGCAACAACAGCAATTGCATTCTGTGGGAGCTGAGTCTCCTTTGCAGTCGCCTTTGAGACAACAGTCTCCATCACCACCTGTTAATGTGCACTATCCTCATCAAATGCGGATATTGGCTGAGCAAGACCATCCACAGACTTTTAAAATGTCTCAATTTTCAGGACGTCTACGGAGCCAAGATATTCAAGATTCATCATCTGTCCTTCCACATGCTATGCAGGTTGGTAACTCACAGAGATCACGTCAAAAGGACTTGCAGGGTCCATTGCCTTCAGTGTCTACTTTTCAGCCAAGACAACATAATGCAGCTTCGCAGCCACAGCATCTTGGTTCTGATACTGAAGCGGCTGAGATGAAGGAAACGATGGCCCGCTCTAAAGAAACTTCAGAGCAGTCAACTACAAGTACTATGTTAGCTGCAGTTATGAAGAGTGGGATCTTCAACAGTGGTCAGTCGAGTACAAATTTTTTGGACAGAAGGAACCTTCCATCAAAAGTAGGGGTTCAGCCTAACCGGCCAAGTGGATCATCTCCTACAACGTCAGTTTCTTCAGGGCCTGGGGTCGAATCTCCATCTCGATCAGGTCCTTCTAATGATGACTCGTCTTCTCTGCCAAAAGAATCTCAAGGAAAGGTTAGAGCCCCATCAAGGCTGCCTGCTTTACCACCAGCTTCCTCTACTGTGAGTAGTGCCTCTGCCAAGACCTCAAATGCCACCAATAGTAAATCTAATCCAGTTTCAAACCTTTTAAGCTCATTAGTTGCAAAGGGTTTAATTTCTGCAAAAATAGACTCATCTACTGAGGTGCCAGCTGAGGTGCTAATTCGATTGGACGATCAGAGCCAAAGCATCTCCACCAGTAGGGCTTTGCCACCTGTGTCAGTTACTGATTCTGCAACTGTTCCTGCTTTACCTACTGAAGATGATCAGCCTGCAAAAGGTTCCTCTGGTCAATCAACCCCCCCAGAAATAAAAGATCTAATTGGCTTCGAGTTTAAGCCCAGTGTGATCCGAAAATTGCATTTACCTGTGATCGGAGAACTATTTGATAATTTCCCTCATCATTGCAGCGTTTGTGGCCTTAGGCTTAAACATCAAGGACAATTTAATAGACACTTGGAGTGGCATGCTATGAGAGAAAGAGAACAAAGTGATGTATCGAAGGCCTCAAGGAGATGGTATTTGAGGTCAAGTGACTGGGTTGTTGGCAAGGATGAAATGTCATCCGAGAATGAGGGTGTTGATCCCATAGATTTACATGGCAATAAATCAGATATAAGTAAAGAGGATGCTAAGGTTCCATCTGATGAAGAGCAGTGCTTGTGTTTGCTGTGTGGTGAGCTGTTTGAAGATTTTTATTGTCAAGAAAGGGATGAGTGGATGTTCAAAGGGGCGGTTTACCTGCCTGTCTCCAGTTGTGATAGTGAGATGTACATTAATGGCGGTAGTGAAAGAGGTCCCATTGTACACACTTGGTGCTTATCTGGGAGCTCCATATCTAGCACCCCTACAAAGGTAAGGCGTATTATCTGA 3120 0.4494 MDMDSSRRPFDRSREPGMKKPRLTDELERGSNPSLRPFPQRQVASGVNSLTQTRFRTNDRDSESGEAGRGGYQPQPLHQELVNQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDSSVHSSMRHLFGTWKGVFPSQTLQMIEKDLCFTPAVNGSSSASALRSDSQSQRPQHSIHVNPKYLERQRLQQSGRIKGTNDIAGTTTNSSDGAERPDRALGAARPWMDSSANMHNIQGSNRDPYNDSVPDKGIGTSYGGEEYGSDLSRNSGLGIGGAGGRTSELARDKAWYKAGSNAADMMSVQRNGFSLKRSLSNHEAPKSTNLDEQNQPTRSLASIKSNLLSSSWKNSEEEEYMWDEVSAGMTEHGASNVSSNLGKDCWTADDDNLAVEGHLQNTFREDRNVTTEMKRLPAFGHRPSLSWKSQQQQPFDELNNRPYPSEGIGSTLGRLPNTVNSSNVKIGNRPFLSNAALGSLGTVQQQQLHSVGAESPLQSPLRQQSPSPPVNVHYPHQMRILAEQDHPQTFKMSQFSGRLRSQDIQDSSSVLPHAMQVGNSQRSRQKDLQGPLPSVSTFQPRQHNAASQPQHLGSDTEAAEMKETMARSKETSEQSTTSTMLAAVMKSGIFNSGQSSTNFLDRRNLPSKVGVQPNRPSGSSPTTSVSSGPGVESPSRSGPSNDDSSSLPKESQGKVRAPSRLPALPPASSTVSSASAKTSNATNSKSNPVSNLLSSLVAKGLISAKIDSSTEVPAEVLIRLDDQSQSISTSRALPPVSVTDSATVPALPTEDDQPAKGSSGQSTPPEIKDLIGFEFKPSVIRKLHLPVIGELFDNFPHHCSVCGLRLKHQGQFNRHLEWHAMREREQSDVSKASRRWYLRSSDWVVGKDEMSSENEGVDPIDLHGNKSDISKEDAKVPSDEEQCLCLLCGELFEDFYCQERDEWMFKGAVYLPVSSCDSEMYINGGSERGPIVHTWCLSGSSISSTPTKVRRII 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 213 318 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 811 853 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 35 55 - -
Mibi02g1285 1039 CDD CID_Pcf11 82 194 - -
Mibi02g1285 1039 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Mibi02g1285 1039 FunFam polyadenylation and cleavage factor homolog 4 74 202 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 237 264 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 1 29 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 467 502 - -
Mibi02g1285 1039 SUPERFAMILY ENTH/VHS domain 78 206 IPR008942 -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 696 738 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 533 559 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 811 832 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 281 295 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 601 640 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 751 775 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 470 485 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 213 229 - -
Mibi02g1285 1039 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 37 1029 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 601 641 - -
Mibi02g1285 1039 ProSitePatterns Zinc finger C2H2 type domain signature. 885 905 IPR013087 -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 533 557 - -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 1 76 - -
Mibi02g1285 1039 SMART 558neu5 80 202 IPR006569 -
Mibi02g1285 1039 MobiDBLite consensus disorder prediction 678 775 - -
Mibi02g1285 1039 Pfam CID domain 86 195 IPR006569 -
Mibi02g1285 1039 Gene3D - 74 202 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1285 Mibi-ChrMibi02 12738239 12745063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1285 54 412 C2H2 Transcription Factor Family AT4G04885 37.534 1.25e-55 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1285 CID 9.8e-14 CL0020
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1285 02 12738239 12745063 Mibi02g1285 02 12738239 12745063 ECH