Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi02g1285 | ATGGACATGGATAGCTCGCGTAGACCATTCGATAGATCTCGAGAGCCTGGTATGAAGAAACCTCGACTGACCGACGAGCTCGAGCGCGGTTCAAATCCTAGTCTCCGACCGTTTCCTCAGCGACAAGTGGCTTCTGGAGTTAATTCCTTAACCCAGACAAGGTTTAGAACAAACGACAGAGATTCCGAAAGTGGTGAAGCTGGTCGCGGTGGATACCAGCCCCAACCGCTCCATCAAGAGCTTGTTAATCAGTACAAAACCGCACTTGCTGAGCTGACATTCAATTCGAAGCCAATAATCACCAACTTGACTATAATTGCAGGCGAGAATCTTTATGCCGCGAAGGCAATTGCTGCCACTGTTTGTGCTAACATTCTAGAGGTTCCCACTGAACAAAAGCTGCCATCTCTTTATCTTTTAGACAGTATTGTTAAGAATATTGGGCGGGACTATATAAAGTACTTTGCTGCTAGACTACCTGAGGTATTCTGCAAGGCATACAGACAGGTTGATTCTTCTGTCCATTCAAGCATGAGGCACCTTTTTGGAACTTGGAAAGGAGTCTTTCCATCCCAGACCCTCCAGATGATTGAGAAGGATCTTTGCTTCACTCCTGCTGTCAATGGTTCATCTTCTGCATCTGCACTGAGGAGTGATTCACAGTCACAACGACCACAGCATAGTATCCACGTGAATCCTAAATATTTGGAGAGGCAGCGTCTTCAGCAGTCTGGCAGGATTAAAGGAACAAATGATATTGCTGGAACTACTACAAACTCTAGTGATGGTGCAGAAAGGCCAGATAGAGCATTAGGTGCTGCTCGACCATGGATGGATTCCAGTGCTAACATGCATAACATTCAGGGCTCTAATAGAGATCCATATAATGATTCTGTTCCTGATAAGGGCATTGGTACATCCTATGGAGGCGAGGAATATGGTTCTGATCTTTCAAGGAACTCAGGTTTGGGTATTGGAGGAGCTGGTGGCAGGACTTCTGAGTTAGCACGTGACAAAGCTTGGTACAAAGCAGGCAGCAATGCTGCAGACATGATGTCTGTCCAAAGGAATGGTTTCAGTCTAAAGCGTAGCTTATCAAATCATGAAGCACCAAAGTCCACCAACTTGGATGAACAAAATCAGCCTACACGAAGCTTAGCTAGCATAAAGAGTAATCTCTTGTCTAGTAGCTGGAAAAATTCTGAGGAAGAGGAGTACATGTGGGATGAGGTGAGCGCTGGAATGACTGAGCATGGTGCATCTAATGTCTCTAGCAACTTGGGCAAAGATTGTTGGACTGCTGATGACGACAATTTGGCAGTTGAAGGTCACCTTCAAAACACGTTCCGTGAAGATAGAAATGTAACCACTGAAATGAAACGCCTACCTGCTTTTGGTCATCGGCCATCATTATCTTGGAAATCACAGCAGCAGCAGCCTTTTGATGAGCTGAATAATAGGCCATATCCTTCAGAAGGCATTGGATCCACTCTTGGTAGGTTGCCAAACACTGTGAATTCTTCTAATGTCAAAATTGGAAATCGGCCTTTCTTGTCAAATGCCGCATTAGGATCGTTAGGAACAGTGCAACAACAGCAATTGCATTCTGTGGGAGCTGAGTCTCCTTTGCAGTCGCCTTTGAGACAACAGTCTCCATCACCACCTGTTAATGTGCACTATCCTCATCAAATGCGGATATTGGCTGAGCAAGACCATCCACAGACTTTTAAAATGTCTCAATTTTCAGGACGTCTACGGAGCCAAGATATTCAAGATTCATCATCTGTCCTTCCACATGCTATGCAGGTTGGTAACTCACAGAGATCACGTCAAAAGGACTTGCAGGGTCCATTGCCTTCAGTGTCTACTTTTCAGCCAAGACAACATAATGCAGCTTCGCAGCCACAGCATCTTGGTTCTGATACTGAAGCGGCTGAGATGAAGGAAACGATGGCCCGCTCTAAAGAAACTTCAGAGCAGTCAACTACAAGTACTATGTTAGCTGCAGTTATGAAGAGTGGGATCTTCAACAGTGGTCAGTCGAGTACAAATTTTTTGGACAGAAGGAACCTTCCATCAAAAGTAGGGGTTCAGCCTAACCGGCCAAGTGGATCATCTCCTACAACGTCAGTTTCTTCAGGGCCTGGGGTCGAATCTCCATCTCGATCAGGTCCTTCTAATGATGACTCGTCTTCTCTGCCAAAAGAATCTCAAGGAAAGGTTAGAGCCCCATCAAGGCTGCCTGCTTTACCACCAGCTTCCTCTACTGTGAGTAGTGCCTCTGCCAAGACCTCAAATGCCACCAATAGTAAATCTAATCCAGTTTCAAACCTTTTAAGCTCATTAGTTGCAAAGGGTTTAATTTCTGCAAAAATAGACTCATCTACTGAGGTGCCAGCTGAGGTGCTAATTCGATTGGACGATCAGAGCCAAAGCATCTCCACCAGTAGGGCTTTGCCACCTGTGTCAGTTACTGATTCTGCAACTGTTCCTGCTTTACCTACTGAAGATGATCAGCCTGCAAAAGGTTCCTCTGGTCAATCAACCCCCCCAGAAATAAAAGATCTAATTGGCTTCGAGTTTAAGCCCAGTGTGATCCGAAAATTGCATTTACCTGTGATCGGAGAACTATTTGATAATTTCCCTCATCATTGCAGCGTTTGTGGCCTTAGGCTTAAACATCAAGGACAATTTAATAGACACTTGGAGTGGCATGCTATGAGAGAAAGAGAACAAAGTGATGTATCGAAGGCCTCAAGGAGATGGTATTTGAGGTCAAGTGACTGGGTTGTTGGCAAGGATGAAATGTCATCCGAGAATGAGGGTGTTGATCCCATAGATTTACATGGCAATAAATCAGATATAAGTAAAGAGGATGCTAAGGTTCCATCTGATGAAGAGCAGTGCTTGTGTTTGCTGTGTGGTGAGCTGTTTGAAGATTTTTATTGTCAAGAAAGGGATGAGTGGATGTTCAAAGGGGCGGTTTACCTGCCTGTCTCCAGTTGTGATAGTGAGATGTACATTAATGGCGGTAGTGAAAGAGGTCCCATTGTACACACTTGGTGCTTATCTGGGAGCTCCATATCTAGCACCCCTACAAAGGTAAGGCGTATTATCTGA | 3120 | 0.4494 | MDMDSSRRPFDRSREPGMKKPRLTDELERGSNPSLRPFPQRQVASGVNSLTQTRFRTNDRDSESGEAGRGGYQPQPLHQELVNQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANILEVPTEQKLPSLYLLDSIVKNIGRDYIKYFAARLPEVFCKAYRQVDSSVHSSMRHLFGTWKGVFPSQTLQMIEKDLCFTPAVNGSSSASALRSDSQSQRPQHSIHVNPKYLERQRLQQSGRIKGTNDIAGTTTNSSDGAERPDRALGAARPWMDSSANMHNIQGSNRDPYNDSVPDKGIGTSYGGEEYGSDLSRNSGLGIGGAGGRTSELARDKAWYKAGSNAADMMSVQRNGFSLKRSLSNHEAPKSTNLDEQNQPTRSLASIKSNLLSSSWKNSEEEEYMWDEVSAGMTEHGASNVSSNLGKDCWTADDDNLAVEGHLQNTFREDRNVTTEMKRLPAFGHRPSLSWKSQQQQPFDELNNRPYPSEGIGSTLGRLPNTVNSSNVKIGNRPFLSNAALGSLGTVQQQQLHSVGAESPLQSPLRQQSPSPPVNVHYPHQMRILAEQDHPQTFKMSQFSGRLRSQDIQDSSSVLPHAMQVGNSQRSRQKDLQGPLPSVSTFQPRQHNAASQPQHLGSDTEAAEMKETMARSKETSEQSTTSTMLAAVMKSGIFNSGQSSTNFLDRRNLPSKVGVQPNRPSGSSPTTSVSSGPGVESPSRSGPSNDDSSSLPKESQGKVRAPSRLPALPPASSTVSSASAKTSNATNSKSNPVSNLLSSLVAKGLISAKIDSSTEVPAEVLIRLDDQSQSISTSRALPPVSVTDSATVPALPTEDDQPAKGSSGQSTPPEIKDLIGFEFKPSVIRKLHLPVIGELFDNFPHHCSVCGLRLKHQGQFNRHLEWHAMREREQSDVSKASRRWYLRSSDWVVGKDEMSSENEGVDPIDLHGNKSDISKEDAKVPSDEEQCLCLLCGELFEDFYCQERDEWMFKGAVYLPVSSCDSEMYINGGSERGPIVHTWCLSGSSISSTPTKVRRII | 1039 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 213 | 318 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 811 | 853 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 35 | 55 | - | - | |
Mibi02g1285 | 1039 | CDD | CID_Pcf11 | 82 | 194 | - | - | |
Mibi02g1285 | 1039 | ProSiteProfiles | CID domain profile. | 77 | 205 | IPR006569 | - | |
Mibi02g1285 | 1039 | FunFam | polyadenylation and cleavage factor homolog 4 | 74 | 202 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 237 | 264 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 467 | 502 | - | - | |
Mibi02g1285 | 1039 | SUPERFAMILY | ENTH/VHS domain | 78 | 206 | IPR008942 | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 696 | 738 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 533 | 559 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 811 | 832 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 601 | 640 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 751 | 775 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 470 | 485 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 213 | 229 | - | - | |
Mibi02g1285 | 1039 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 37 | 1029 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 601 | 641 | - | - | |
Mibi02g1285 | 1039 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 885 | 905 | IPR013087 | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 533 | 557 | - | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Mibi02g1285 | 1039 | SMART | 558neu5 | 80 | 202 | IPR006569 | - | |
Mibi02g1285 | 1039 | MobiDBLite | consensus disorder prediction | 678 | 775 | - | - | |
Mibi02g1285 | 1039 | Pfam | CID domain | 86 | 195 | IPR006569 | - | |
Mibi02g1285 | 1039 | Gene3D | - | 74 | 202 | IPR008942 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi02g1285 | Mibi-ChrMibi02 | 12738239 | 12745063 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi02g1285 | 54 | 412 | C2H2 Transcription Factor Family | AT4G04885 | 37.534 | 1.25e-55 | 206 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mibi02g1285 | CID | 9.8e-14 | CL0020 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi02g1285 | 02 | 12738239 | 12745063 | Mibi02g1285 | 02 | 12738239 | 12745063 | ECH |