Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1280 ATGTCCACTATTATCCACGCGTCGACCTCTCATTGGCAGACTTTAACGTCTCTTAATATTAAACAACTAATTTTCCTCCCTGCCGCTTCTTCCTCCCCTCCTCCTCTTCACTCCCTCACACATACACCTTCTTCTTCTTCTTCTTCCTCTAGCTCACTGTCTCATATTATGGAGATGGAAGATAACCACATCCACAACAACAGCAATCACCAGCAGCAGCAATACGCCGTGGCGGATCTCCGCCACCTCATCAACGGCACTCCGTCGGGCCATTTCACCTCCTCCATTCCTCCTCCGGCGCATCCCACGGGGGAGCTGTTCCAGACTCACCGGAGTCTCACTCCCTCCCCACACTACGACATCCTCATGTTTGGCCGTCACTCCCTCCACCACGACTTCCCCTCCGATTCCCCTCCTCCCAACAACATCACTAATTCCTCCGCCGCCTTCACTCCTCCTCCTCCTCCTCCTCCTCCTGACACCACCGGCTGCCTCCCTGGGGATGCATCCACCGGAAGATGGCCCCGCCAGGAGACCCTCACCCTCCTTGACATCAGATCTCGCCTCCACCCTCAATTCAAAGACTCCAACCACAAAGGCCCCTTATGGGATGAGGTCTCCAGGATCATGTCGGAAGAATATGGATACCAAAGGAGTGGGAAGAAATGCAGGGAGAAATTCGAAAACTTGTACAAATATTACAAGAAGACAAAAGAAGGCAAAGCAAGGAGACAAGACGGGAAGCATTACAGATTCTTCCGTCAACTTGAAGCATTGTATGGAGGAAGCGCCAACTCAAACTCACTACCAGAAACCAATTATGGAAGCAGCGGAGTTGGCTTGATTCAAACACCTTCGTCCCAAACAAATCATCATCATCATCAAGACATGTTTCAGTCTCATCACAGCCACAAGGCTAGTGACAGCCTTAGCCTCACGAACTCATCAGATTTTGGCACGTCATCATCGGAGGAGGACAACAATAATATCTGCAGCATGGACAATGATTCAACGGAGAAAGGGAGGAAGAGAAGCAGTAGCGGAGGCAGATGGAAGGCGAAGATAAAAGAATTCATAGACTCACAGATGAAGAAGCTGATAGAGAAGCAAGAGGCATGGATGGATAGGCTTGTGAAGACGCTTGAACAGAAAGAGAAAGAGAGGGTTTTAAGAGAGGAAGAATGGAGAAGACAAGAGGCTGCAAGGTTGGAAATGGAACACAAGTTTCGAGCAAAAGAGAGAGCATGGATTGAAGCAAGAGATGCTGCTTTAATGGAAGCCTTGCAGAAACTAACAGGAAAAGAGGTAGGAAATAAGGCTCAATCTCCTGTTGAGCAAGCTCTAATTATGGCAAACCAAAATGAGGAGGGAAGTGAAATCCTCAATGTAAGTCATAGAGGTGTGGACACGTGGCAAAAAAGTGAGGTCACAAGGCTGCTAGAATTAAGGGCGGAGATGGAATCTGGATTTCAGCAAAGTGGGTGTTCGGAGGAGGTTATGTGGGAGGAAATCGCCAGTAAAATGGCTTGCTTTGGATATGAAAGGAATGCTTTGATGTGTAAACACAAGTGGGAAAGCATAACAAAGGAGGGAGTGAAGAAGCGAAAGGAAAAGTCTAGAAGCTGCTTTTACTTCGATGGGAACATGAATAATAATAATAATGAGCAGCCATTATCCTTGTATAATAACCAAGGAACTACTACCACCTCGTACTGTGATATCAACGTTAAGCATCACGACAATGAGAGGCTACACACAAATGATGGCTCTTCACCCTCTAATTCCAATGCGGTTGCGGCGGCTGATGTTAACTGTTTTCCCTTCTTTATTAGCACCGAAGGATCAGAAAATTTGTGGGAAAATTACGGCTTGAAGATTAATAAGGCAAATCATCATCAGAACCAGTGA 1908 0.4701 MSTIIHASTSHWQTLTSLNIKQLIFLPAASSSPPPLHSLTHTPSSSSSSSSSLSHIMEMEDNHIHNNSNHQQQQYAVADLRHLINGTPSGHFTSSIPPPAHPTGELFQTHRSLTPSPHYDILMFGRHSLHHDFPSDSPPPNNITNSSAAFTPPPPPPPPDTTGCLPGDASTGRWPRQETLTLLDIRSRLHPQFKDSNHKGPLWDEVSRIMSEEYGYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGGSANSNSLPETNYGSSGVGLIQTPSSQTNHHHHQDMFQSHHSHKASDSLSLTNSSDFGTSSSEEDNNNICSMDNDSTEKGRKRSSSGGRWKAKIKEFIDSQMKKLIEKQEAWMDRLVKTLEQKEKERVLREEEWRRQEAARLEMEHKFRAKERAWIEARDAALMEALQKLTGKEVGNKAQSPVEQALIMANQNEEGSEILNVSHRGVDTWQKSEVTRLLELRAEMESGFQQSGCSEEVMWEEIASKMACFGYERNALMCKHKWESITKEGVKKRKEKSRSCFYFDGNMNNNNNEQPLSLYNNQGTTTTSYCDINVKHHDNERLHTNDGSSPSNSNAVAAADVNCFPFFISTEGSENLWENYGLKINKANHHQNQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1280 635 MobiDBLite consensus disorder prediction 149 163 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 264 351 - -
Mibi02g1280 635 Coils Coil 367 394 - -
Mibi02g1280 635 CDD GT1 470 530 - -
Mibi02g1280 635 Gene3D - 471 531 - -
Mibi02g1280 635 Gene3D - 174 236 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 336 351 - -
Mibi02g1280 635 CDD GT1 173 238 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 33 54 - -
Mibi02g1280 635 PANTHER FI21293P1 163 584 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 264 293 - -
Mibi02g1280 635 Pfam Myb/SANT-like DNA-binding domain 469 545 IPR044822 -
Mibi02g1280 635 Pfam Myb/SANT-like DNA-binding domain 173 259 IPR044822 -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 86 112 - -
Mibi02g1280 635 SMART sant 170 233 IPR001005 -
Mibi02g1280 635 SMART sant 467 530 IPR001005 -
Mibi02g1280 635 FunFam Trihelix transcription factor GT-2 471 534 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 304 335 - -
Mibi02g1280 635 ProSiteProfiles Myb-like domain profile. 166 231 IPR001005 -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 130 171 - -
Mibi02g1280 635 ProSiteProfiles Myb-like domain profile. 471 528 IPR001005 -
Mibi02g1280 635 FunFam trihelix transcription factor PTL-like 174 236 - -
Mibi02g1280 635 MobiDBLite consensus disorder prediction 32 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1280 Mibi-ChrMibi02 12694126 12698683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1280 71 628 Trihelix Transcription Factor Family AT5G03680 44.643 2.53e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi02g1280 Myb_DNA-bind_4 1.1e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1280 02 12694126 12698683 Mibi02g1280 02 12694126 12698683 ECH