Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1278 ATGAACAAGAAGAGAAAAGCTGGAAGGAAGAAGTTCCAAGAAACTCGTCATCCAACATACAAAGGCGTGAGGCAAAGAAATGGGAAGTGGGTTTGCGAGCTTCGCCAACCTAATAACAACAAATCACGCTTGTGGCTTGGAACATTTGGGAGCCCAGACATGGCAGCCATGGCTCATGATGTGGCTGCTCTTGCTTTCAAGGGAGATTCTGCTTCCTTAAATTTCCCTGATTCTGCTTCCTCCTTACCTCGCCTTAATCATCGTACCTCCTCCCTCAGAGCCATACAGTTCGCCGCCATGGAAGCCGCCGAGAAGCTTCTTATCGACGGTGGCGGTGGGAAGAACATGTCGCCGGAGTTGTGTGACATGGAAGGTTGTGAGATTGATTTGGAAGAAGAATCAGGGGAGGAGGTGGCGAGGAGTAAGTATTGGGATGAGGAAGAGGTGTTTAACATGCCTTTTCTTATGGACAGTATGGCCGAAGCCTTGGTTATCACTCCACCTGCCTTGCATAGAGGCTTTGATTGGGACGACATCGAAACTACCACCGGCTTCAATCTTTGGGTTGATTGA 573 0.4904 MNKKRKAGRKKFQETRHPTYKGVRQRNGKWVCELRQPNNNKSRLWLGTFGSPDMAAMAHDVAALAFKGDSASLNFPDSASSLPRLNHRTSSLRAIQFAAMEAAEKLLIDGGGGKNMSPELCDMEGCEIDLEEESGEEVARSKYWDEEEVFNMPFLMDSMAEALVITPPALHRGFDWDDIETTTGFNLWVD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1278 190 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 188 IPR045277 GO:0003700
Mibi02g1278 190 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Mibi02g1278 190 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mibi02g1278 190 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Mibi02g1278 190 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Mibi02g1278 190 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Mibi02g1278 190 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Mibi02g1278 190 MobiDBLite consensus disorder prediction 1 20 - -
Mibi02g1278 190 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mibi02g1278 190 PRINTS Ethylene responsive element binding protein signature 58 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1278 Mibi-ChrMibi02 12625025 12625597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1278 4 188 AP2-EREBP Transcription Factor Family AT4G25470 45.361 1.11e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1278 AP2 6.9e-12 CL0081