Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1275 ATGGACTTCCATCTCAAGCAATGGAAAAACCAGCACGACCCTGAATCAGAAGATCAACATTTTGCAAAGATGCCAAGGCTCATGCTTGAACCCCATCTGCATTCTTCACCCCCATCTTCCCCTGCTCTCCCTCTATTTGTTCCCGAACTCAACTCCAAAGTCAGCTCCCTCTCCTCTTTTCCTGATTGCTCATCACCACCCACTCCCAGGTTCCCAAGAATGGGAAGTTATTTAAGTGTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCACTGATATTCAGGTACATGTTGGCTGGTGCTGCTGTTCCCCCTGAGCTTCTTCTGCCAATTAAGAAGAGCCTTCTTCATTCCTCCCCTTATTTCCTCCATTATCAGCCTTCTCTGTTGCAATCGGGATACTGGGGTGGGGCCACCATGGATCCAGAGCCTGGCCGTTGCCGGAGGACGGACGGCAAGAAATGGCGGTGCTCCAGAGACGTGGTCACCGGTCAGAAGTACTGTGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCCACGCCGCCCACCGCCGGAGCCGGCGGTTGTCCCTCGCCTACAACAACTGCCTCTGTTTCTGCCCCTCATTTCACACCAACAACGTTGAGATCCCCTTTCGATCTCCTTCAGCTGAAACGATGTTCATCTGGGACCATCAAGAATGAAAAAGAGAACGTGTTTGAAAATCAAAATGGAGAAAATGTGGGTGGTGAAGGGAGATCAGATGGGCATATTCTGAGGCATTTTTTCGATGATTGGCCACGATCACTTCAGGAGGAACCTGACAATGCCGAAAGTAACGCCAGCTCCATCAACTCAGCCACATGCCTCTCTATTTCAATGCCCGGAAAGGCTTCTTCTTCTTCGGACGTGTCACTGAAATTGTCCACGGGCGATGATGCAGAGGATCCATGTCCCAGAAGTGGGAATGTGGGCCCACAGCATTTGCAGTTGAATTGGGCTGGAGGATGGGCCTCTTCCGCTAATCATGTGGCTTCTATGGGAGGACCACTAGCAGAAGCTCTCAGATCATCTACCACCACATCTTCACCCACAAGTGTCTTGCACCAGTTGCCTCGTAGTTCTGCTTCTGAAACTAGCTTCATTAGCACTTAG 1152 0.513 MDFHLKQWKNQHDPESEDQHFAKMPRLMLEPHLHSSPPSSPALPLFVPELNSKVSSLSSFPDCSSPPTPRFPRMGSYLSVAQWQELELQALIFRYMLAGAAVPPELLLPIKKSLLHSSPYFLHYQPSLLQSGYWGGATMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVEVPTPPTAGAGGCPSPTTTASVSAPHFTPTTLRSPFDLLQLKRCSSGTIKNEKENVFENQNGENVGGEGRSDGHILRHFFDDWPRSLQEEPDNAESNASSINSATCLSISMPGKASSSSDVSLKLSTGDDAEDPCPRSGNVGPQHLQLNWAGGWASSANHVASMGGPLAEALRSSTTTSSPTSVLHQLPRSSASETSFIST 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1275 383 ProSiteProfiles QLQ domain profile. 77 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi02g1275 383 MobiDBLite consensus disorder prediction 173 210 - -
Mibi02g1275 383 ProSiteProfiles WRC domain profile. 140 184 IPR014977 -
Mibi02g1275 383 Pfam WRC 141 183 IPR014977 -
Mibi02g1275 383 MobiDBLite consensus disorder prediction 352 383 - -
Mibi02g1275 383 PANTHER GROWTH-REGULATING FACTOR 5 52 299 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi02g1275 383 MobiDBLite consensus disorder prediction 295 326 - -
Mibi02g1275 383 SMART QLQ_2 76 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi02g1275 383 MobiDBLite consensus disorder prediction 193 210 - -
Mibi02g1275 383 Pfam QLQ 79 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1275 Mibi-ChrMibi02 12586586 12588612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1275 1 370 GRF Transcription Factor Family AT3G52910 49.100 1.97e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi02g1275 WRC 4.7e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1275 02 12586586 12588612 Mibi06g2135 06 41793010 41795960 CCT
Mibi02g1275 02 12586586 12588612 Mibi02g1275 02 12586586 12588612 ECH