Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1270 ATGGGATCGATTAAATGGGCCAAGGAATCAGGCCCATTAAAATCTGGCCCGAGAGGAGTTTTGATAAAAGAAACCCTAGCACTATATATCGTTGCGCTCGGCCATCTTCTTCCTTCTTATGCGTTAAGAGTTCGCCGCCTCTTCTCCGTGCCGATCTCTATAATCTCAGGTAATACCGCTTCTAAAATGAAGGTGATTGCTGCATATTTGCTCGCCGTATTGGGTGGCAACCCTTGCCCTTCCGCCAAAGATATCAAGCATATCCTTGGCTCTGTGGGAGCAGAAGCGGAAGATGATAGAATTGAGCTTCTCTTGTCTGAATTGGAGGGCAAAGATTTAGCAGAGGTTATTGCCAGTGGTAGGGAAAAGTTGGCCTCAGTGCCCGGTGGTGGTGGTGGTGCAGTTGCAGTGGCTGCTGCACCTGGAGCTGGTGGTGCCGCTGCACCAGCTGCGGCTGAGCCAAAGAAAGAGGAAAAGGAGGAGCCCAAAGAGGAATCTGATGATGATATGGGCTTCAGCCTCTTCGATTAA 531 0.4991 MGSIKWAKESGPLKSGPRGVLIKETLALYIVALGHLLPSYALRVRRLFSVPISIISGNTASKMKVIAAYLLAVLGGNPCPSAKDIKHILGSVGAEAEDDRIELLLSELEGKDLAEVIASGREKLASVPGGGGGAVAVAAAPGAGGAAAPAAAEPKKEEKEEPKEESDDDMGFSLFD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1270 176 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 63 176 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mibi02g1270 176 Hamap 50S ribosomal protein L12 [rpl12]. 64 176 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mibi02g1270 176 Gene3D - 62 121 IPR038716 -
Mibi02g1270 176 MobiDBLite consensus disorder prediction 152 170 - -
Mibi02g1270 176 FunFam 60S acidic ribosomal protein P2 60 121 - -
Mibi02g1270 176 MobiDBLite consensus disorder prediction 145 176 - -
Mibi02g1270 176 CDD Ribosomal_P2 63 176 IPR044076 GO:0002182|GO:0003735|GO:0022625
Mibi02g1270 176 Pfam 60s Acidic ribosomal protein 80 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1270 Mibi-ChrMibi02 12538149 12539548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1270 63 176 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.035 6.52e-30 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1270 02 12538149 12539548 Mibi02g1270 02 12538149 12539548 ECH