Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1260 ATGGCAGAAGAGCAACGATGTGAAACTTCCGAAGGCCACCGTTTCTGCGCCAACAACTGCGGCTTCTTCGGAAGCCCGGCCACCATGAATCTCTGTTCCAAATGCTACAGAGATTTCTGCCTCAAAGAACAACAAGAAGCCGCTACGAAATCAACCATCCAAACCGCTCTTTCATCCTCATCATCAACCCCTACGCCTTCGCCGGCCATGGAGTCCCTCCCTCCTCCGCCGCCGCCGAAATCGCCGGACGCTGCGGCGGAGGCTCCGATCTCGGCGGCGCCGGCGGCCTCCGTGCCAGATTTGACTGTGGCGCAACCGAACCGGTGTGCCACGTGTCGTAAACGGGTCGGGTTTACGGGGTTCAAGTGCAAGTGCGGGATCACGTTTTGTGGGGCCCACCGGTACCCGGAGAAACATGGGTGTGGCTTTGATTTTAAGGCGGTGGGGCGAGAGGAAATAAGTCGAGCGAATCCTGTGGTCATAGCTGAGAAGCTCCGTAAGATTTAA 507 0.574 MAEEQRCETSEGHRFCANNCGFFGSPATMNLCSKCYRDFCLKEQQEAATKSTIQTALSSSSSTPTPSPAMESLPPPPPPKSPDAAAEAPISAAPAASVPDLTVAQPNRCATCRKRVGFTGFKCKCGITFCGAHRYPEKHGCGFDFKAVGREEISRANPVVIAEKLRKI 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1260 168 Gene3D - 79 163 IPR035896 -
Mibi02g1260 168 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 168 - -
Mibi02g1260 168 SMART AN1_Zf_4 109 146 IPR000058 GO:0008270
Mibi02g1260 168 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mibi02g1260 168 Pfam A20-like zinc finger 16 37 IPR002653 GO:0003677|GO:0008270
Mibi02g1260 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 61 - -
Mibi02g1260 168 MobiDBLite consensus disorder prediction 51 67 - -
Mibi02g1260 168 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mibi02g1260 168 ProSiteProfiles Zinc finger AN1-type profile. 103 149 IPR000058 GO:0008270
Mibi02g1260 168 SUPERFAMILY AN1-like Zinc finger 102 163 IPR035896 -
Mibi02g1260 168 MobiDBLite consensus disorder prediction 68 84 - -
Mibi02g1260 168 FunFam Zinc finger AN1-type containing 6 84 164 - -
Mibi02g1260 168 Gene3D - 1 65 - -
Mibi02g1260 168 Pfam AN1-like Zinc finger 109 145 IPR000058 GO:0008270
Mibi02g1260 168 MobiDBLite consensus disorder prediction 51 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1260 Mibi-ChrMibi02 12362971 12363477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1260 1 168 C2H2 Transcription Factor Family AT3G52800 53.801 1.24e-52 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1260 02 12362971 12363477 Mibi06g2125 06 41710544 41711026 CCT
Mibi02g1260 02 12362971 12363477 Mibi02g1260 02 12362971 12363477 ECH