Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1240 ATGACCTTGAAGAGGTTTCTAAAACCCATCGCTAAACCATCACTCTCGCCGCCGCCGCCGCTCTCTCCGATCCCCAACCCTCCGCTTCCGGCGCCACCTGTCACTCCTCTCCCCCCACTTCCTTCACTCACTCTCTCTTCCGCTTCCCACTATCATCACCTCCTTCACTTCCTTAAAGCCCATCTCACTCCTCCTTTCACACCACACACCCTTCTCCACTTCCTCAAATCCAAGCTCCATCACCATCCTACCTTCACCATCTACGATTTCCACATCTTCAATTGGGCCTCCACCATCGATTCCTATCGCCATAATCACTCCACTTTCGAATGGATGGCTCGTACTCTCGCTATCACCAACCGCCTCCTCCAACTTCGAGCTCTTCTTCAATTCATGACTTCCAATCCTTGCCCTTGCTCTGACGGTATTTTCTCTTGCTCTCGAACCGAACCCATATTCCAGTTTTCCATTAACGCTTTTTGTAAAGCTCGCAAATTGGATGATGCTGTTTTCGCTTTTGAGTGTATGCGGAGATTGATTGATGGGAGACCTAATGTGGTGATTTGTAATTGTTTGATTCATGGGTTTGTTAAATGTGGTAGGCATGATGAAGCGTTGGAGTTTTATGATAAGATGATGAGAGATAGAGTCAAGCCTGATGTGTTTACCTTTAATATTTTGATTAGTAGTTATTGTCGGAATTCACAGTTTGGGTTGGCTTTGGATTTGTTTAAGGAGATGAGGGAAAAGGGGTGTAATCCCAATGTGGTTACTTTTAATACTTTGATTAGGGGGCTCTTTAGGGAGCGAAAGATTGAAGAGGGGATTGAGATGGCTTATGAGATGATTGAACTGGGGTGTCAGCTCTCAAGCGTGACTTGTGAGATTTTAGTTGATGGACTTTGTAAGGAAGGTCAGGCTTTACGATCGTGTGAGATATTAGCAGACTTGTCCAGCAAGAGACTTTTACCCAATGGATACGATTATTTTGTTTTGGTGGAAAGTCTTTGTGGGAAAGGTAATGTTGCTAAGGCATTGGAGCTTGTTTATGAGCTATGGTACCAAGGAAATGCCCCAAGCTTGATTGCTTGCACTACATTAATCGACGGTTTAAGGAGCTTGGGGAGGACTGAAGAAGCATATAGATTGTCAGAAAAGATGCTTAAAGAAAATATAATTATGGATATTGTGACTTTCAATTCTGTTCTTCAGGATACTTGTAGTATGAAAAAAACTGTAAATGCAAATAAGTTGAGATTGCTGGCTTCAAAAAAGGGCTTGAAACCAGATGGCATGACCTATAGGATTTTGGTTTCTGGGTATGCTCGAGAGGGCAGTCAAAAGGAGGGAGAGTCAGTGTTAAATGAAATGTTGGACAGGGGATTTATATCTGATCTTGCTACATATAATAAATTGATGAATGGTTTCTCTAATTGA 1437 0.4294 MTLKRFLKPIAKPSLSPPPPLSPIPNPPLPAPPVTPLPPLPSLTLSSASHYHHLLHFLKAHLTPPFTPHTLLHFLKSKLHHHPTFTIYDFHIFNWASTIDSYRHNHSTFEWMARTLAITNRLLQLRALLQFMTSNPCPCSDGIFSCSRTEPIFQFSINAFCKARKLDDAVFAFECMRRLIDGRPNVVICNCLIHGFVKCGRHDEALEFYDKMMRDRVKPDVFTFNILISSYCRNSQFGLALDLFKEMREKGCNPNVVTFNTLIRGLFRERKIEEGIEMAYEMIELGCQLSSVTCEILVDGLCKEGQALRSCEILADLSSKRLLPNGYDYFVLVESLCGKGNVAKALELVYELWYQGNAPSLIACTTLIDGLRSLGRTEEAYRLSEKMLKENIIMDIVTFNSVLQDTCSMKKTVNANKLRLLASKKGLKPDGMTYRILVSGYAREGSQKEGESVLNEMLDRGFISDLATYNKLMNGFSN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1240 478 Pfam PPR repeat 425 457 IPR002885 -
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 255 289 IPR002885 -
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 185 219 IPR002885 -
Mibi02g1240 478 MobiDBLite consensus disorder prediction 12 35 - -
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 290 324 IPR002885 -
Mibi02g1240 478 Gene3D Tetratricopeptide repeat domain 87 248 IPR011990 GO:0005515
Mibi02g1240 478 Gene3D Tetratricopeptide repeat domain 249 320 IPR011990 GO:0005515
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Mibi02g1240 478 Pfam PPR repeat 187 216 IPR002885 -
Mibi02g1240 478 Pfam PPR repeat 157 178 IPR002885 -
Mibi02g1240 478 Gene3D Tetratricopeptide repeat domain 337 478 IPR011990 GO:0005515
Mibi02g1240 478 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 74 371 - -
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 430 464 IPR002885 -
Mibi02g1240 478 TIGRFAM PPR: pentatricopeptide repeat domain 187 221 IPR002885 -
Mibi02g1240 478 TIGRFAM PPR: pentatricopeptide repeat domain 222 256 IPR002885 -
Mibi02g1240 478 TIGRFAM PPR: pentatricopeptide repeat domain 257 290 IPR002885 -
Mibi02g1240 478 TIGRFAM PPR: pentatricopeptide repeat domain 363 395 IPR002885 -
Mibi02g1240 478 TIGRFAM PPR: pentatricopeptide repeat domain 433 464 IPR002885 -
Mibi02g1240 478 MobiDBLite consensus disorder prediction 11 35 - -
Mibi02g1240 478 Pfam PPR repeat family 359 407 IPR002885 -
Mibi02g1240 478 Pfam PPR repeat family 219 267 IPR002885 -
Mibi02g1240 478 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 360 394 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1240 157 476 Glycosyltransferase AT1G05670 30.530 8.26e-44 162