Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1235 ATGTCCTCTTTTCTCACAAAACCATCGCTGAATGCATCTCCATTCCATTCTTCAATCCACAGCCTAAAACTGAGACCCATTCAACGATTCCCTATACTCCCCCAACTTCGACTTTCCCTCACAATCCATAACTCCCACAATCCCCCTTCCATTATTCCTTCAAAGGCAAAAGCTTCTAATACTTTATCACTTTCTCAGACCCTTCAATTCCTCAAACCCTGGCTTCTCTCTGAGCATAAAACCGTCCTCTTGGGTTGGCTATGCAGCGTCATATCTGTTTACTCCCTCTCCCAAATTGTTTCTAAAGTAGGTAATGTTTCTGCTACTATCAGCACCATTGACGCTATCAAGTTGCGAGACGAAGGTTTAGTGCTGGGGGGTTTGGTGATTGCTCGGTTGGTTGCAAGTTATGGGCAGCAAGCCTTTTTATGGGAAGCTGCCCTTAACGCCGTATATAAGCTTAGGGTTTACGTTTTCGACAGGATTTTGCAGAGAGAATTGGGGTATTTTGAAGGCAAGGGTGGTGTTTCATCAGGGGACATTGCGTATCGGATCACCGCGGAAGCTTCGGATATTGCTGATACTTTATATGCTCTCCTCAATACCGTAATCCCCAGCACTCTGCAGCTATCAGCTATGATGATGCGAATGATGGTGATCAACCCTGTCCTTTCTTTGATTTCTGCTGTGGTCATTCCTTGTATGGCACTTTTTGTTGCCTTTCTTGGTCAGAAACTTCGTGCAATATCTAGAAAGGCACATCTTAGCATTGCCACTCTCTCGGCATATCTAAATGAGGTCCTTCCTGCAATTCTCTTTGTGAAAGCAAACAATGCAGAACTATGTGAGAGTAGCAGGTTTAAGAGGCTGGCTAAGATTGACTTTTTTGAACGCCTGAACAAGAAGAGGATGAAGGCAGTTATTCCTCAGATTACACAAGCTATTTATTTCGGAGTTCTAACTATACTTTGTGCTGGTTCAATAGTGGTTTCAAGAGGATCATTTGATGGCTGTAACTTAGTTTCATTTGTGACATCATTGCTGTTTTTGATTGAACCTATCCAGGATGTGGGAAAAGCATACAATGAATTGAGGCAGGGAGAACCAGCTATTGAACGCTTGTTTGATTTGACCACGTTCACAGATAAGGTGGTTGAAAAACCAGATGCTGTTGATTTAGACTCTGTTAAAGGGGAGATAAAGTTTTGTGATGTCTCATTTAAGTACAGTGAAGACATGTTACCCGTTCTGAATAGACTGAATCTTCACATAGGAGCTGGAGAGATAGTTGCTCTTGTTGGTCCCTCTGGTGGAGGGAAAACAACACTTATAAAACTGTTGCTTCGTCTTTATGATCCAGTATCTGGCTGTATACTTATTGATAATCATGACATCCAAAGCATTCGGTTGCATAGTTTGAGAAGACATGTCAGTCTTGTTTCTCAGGATATAACAATTTTTTCAGGATCAGTTGCTGAAAACATTGGTTATAAGGATCTGACCACAGAAATTGACATGGAAAGGGTAAAGCATGCGGCACAAATTGCAAATGCTGACGAATTTATAAGAAATCTTCCAGAAGGATATGATACCGATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGACAGAGACAAAGGCTAGCCATTGCCAGAGCTCTATATAGGAATTCTTCTATATTAATATTGGATGAGGCAACATCTGCTTTAGATAGCAAATCTGAGTTATTGGTGAGACAAGCTGTAAAGCGATTGATGAAAAATCACACTGTGCTGATAATTGCCCATCGCATGGAAACGGTTCGGATGGCTAAACGAGTATTCCTCTTGGATAAGGGGAAGCTAGAAGAGTTGCCTCGTTCTACTGTAATTGGTGGTCACAAGGACTCGTTATCACCTGGTGTGGTGATATAA 1914 0.4195 MSSFLTKPSLNASPFHSSIHSLKLRPIQRFPILPQLRLSLTIHNSHNPPSIIPSKAKASNTLSLSQTLQFLKPWLLSEHKTVLLGWLCSVISVYSLSQIVSKVGNVSATISTIDAIKLRDEGLVLGGLVIARLVASYGQQAFLWEAALNAVYKLRVYVFDRILQRELGYFEGKGGVSSGDIAYRITAEASDIADTLYALLNTVIPSTLQLSAMMMRMMVINPVLSLISAVVIPCMALFVAFLGQKLRAISRKAHLSIATLSAYLNEVLPAILFVKANNAELCESSRFKRLAKIDFFERLNKKRMKAVIPQITQAIYFGVLTILCAGSIVVSRGSFDGCNLVSFVTSLLFLIEPIQDVGKAYNELRQGEPAIERLFDLTTFTDKVVEKPDAVDLDSVKGEIKFCDVSFKYSEDMLPVLNRLNLHIGAGEIVALVGPSGGGKTTLIKLLLRLYDPVSGCILIDNHDIQSIRLHSLRRHVSLVSQDITIFSGSVAENIGYKDLTTEIDMERVKHAAQIANADEFIRNLPEGYDTDIGPRGSTLSGGQRQRLAIARALYRNSSILILDEATSALDSKSELLVRQAVKRLMKNHTVLIIAHRMETVRMAKRVFLLDKGKLEELPRSTVIGGHKDSLSPGVVI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1235 637 CDD ABC_6TM_exporters 122 374 - -
Mibi02g1235 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 400 637 IPR003439 GO:0005524
Mibi02g1235 637 SMART AAA_5 426 614 IPR003593 -
Mibi02g1235 637 Pfam ABC transporter 417 568 IPR003439 GO:0005524
Mibi02g1235 637 Gene3D - 391 631 IPR027417 -
Mibi02g1235 637 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 366 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1235 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 618 IPR027417 -
Mibi02g1235 637 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 72 617 IPR039421 -
Mibi02g1235 637 FunFam ABC transporter related 69 380 - -
Mibi02g1235 637 ProSitePatterns ABC transporters family signature. 540 554 IPR017871 GO:0005524|GO:0016887
Mibi02g1235 637 Pfam ABC transporter transmembrane region 116 353 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1235 637 SUPERFAMILY ABC transporter transmembrane region 77 379 IPR036640 GO:0005524|GO:0016020
Mibi02g1235 637 Gene3D ABC transporter type 1, transmembrane domain 53 379 IPR036640 GO:0005524|GO:0016020
Mibi02g1235 637 FunFam ABC transporter ATP-binding protein 393 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1235 Mibi-ChrMibi02 12153904 12157980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1235 123 634 Calmodulin-binding Proteins AT2G36910 31.332 2.52e-61 219