Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1217 ATGGAAAATATGGCACCGGGATATCGATTTTACCCGACTGAAGAGGAACTCATTTCCTTCTATTTGCAGAGAAAGCTTGAAGGAGACCAGAGGGAGAGCATTAACCGGGTTATTCCCGAGCTTGATATTTATGAATATAATCCTTGGGACCTGCCACAGGTGTCAGGAGAGGCGAGTATGAGGGACACGGAGCAGTGGTTTTTTTTCATTCCGAGACAAGAAAGCGAAGCTAGAGGAGGAAGACCAAGAAGACTCACAACTACTGGCTACTGGAAGGCCACGGGGTCTCCCAACCATGTCTATTCCTCAGATAATCGCATCATAGGCATGAAAAGAACCATGGTCTTCTACAACGGAAGAGCCCCTAATGGCCGCAAAACCGACTGGAAGATGAACGAATACAAGGCCATCGGCCCCCAACCTTCCTCCACCCGTCCCTCTGATCCTCAGTTAAGGCAGGAATACAGTATATGCAGGGTGTACAAGAAGTCAAAGTGCCTGAGAGCGTTTGATAGGAGGCCACCACCGAGGGAGATTCATCAGATTAGTATGGATGATGGGAATGGGGGCTCATCGAGCTCGTCAACACCTCAGCAGCAACAAGTACTGCAAAACATAGCGGCATCAGGATCATCATCAAGGGGAGCGATTGGCACAGCAAGCTCACCGGAGACTTCTTCATCAGGTGGATATGATGATGGCCATAATAATAATGGTGGGCAGGCTTTACACAGTACTGGGGAAGCGGGTCAAATGGATTTGGACTATGAGCCATTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGCCAAGCACGACTCTAACGAGTGA 831 0.4886 MENMAPGYRFYPTEEELISFYLQRKLEGDQRESINRVIPELDIYEYNPWDLPQVSGEASMRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPNGRKTDWKMNEYKAIGPQPSSTRPSDPQLRQEYSICRVYKKSKCLRAFDRRPPPREIHQISMDDGNGGSSSSSTPQQQQVLQNIAASGSSSRGAIGTASSPETSSSGGYDDGHNNNGGQALHSTGEAGQMDLDYEPLLDWEQVDWFLAKHDSNE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1217 276 MobiDBLite consensus disorder prediction 185 245 - -
Mibi02g1217 276 MobiDBLite consensus disorder prediction 169 250 - -
Mibi02g1217 276 SUPERFAMILY NAC domain 3 163 IPR036093 GO:0003677|GO:0006355
Mibi02g1217 276 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Mibi02g1217 276 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Mibi02g1217 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 211 - -
Mibi02g1217 276 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1217 Mibi-ChrMibi02 12022099 12023605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1217 2 267 NAC Transcription Factor Family AT5G22380 45.113 7.99e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g1217 NAM 4.6e-32 No_clan