Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1214 ATGGAGATACGTCTGCGTGAAGGTGAAGCTCACCGGAGGATTCTCCGTCGCAGCAAAATGTGGGCAAGCGCAGAAGGTGGTGCTCCTGAGGTCACTCTAGAAACTTCCATGGGTTCTTTCACCGTTGAGTTATACTACAAGCATGCCCCTAGAACCTGCAGAAACTTCATTGAACTCTCCCGCAGAGGCTATTACGATAACGTTAAATTCCACAGAATCATTAAGGACTTCATAGTACAAGGTGGAGATCCCACTGGAACAGGAAGGGGAGGAGAGTCCATTTATGGTCCAAAATTTGAAGATGAGATAAAGCCGGAGTTGAAGCACACCGGAGCTGGTATCTTGTCCATGGCAAACGCTGGCCCAAACACTAATGGTAGTCAGTTCTTCATCACTTTGGCTCCATGCCCATCTTTGGACGGTAAACACACCATATTTGGAAGAGTTTGTCAGGGGATGGAAATCATCAAGAGACTTGGCAGTGTCCAAACTGATAACAATGATAGGCCTATTCATGATGTGAAGATACTAAGGACATCGGTCAAGGATTGA 552 0.4638 MEIRLREGEAHRRILRRSKMWASAEGGAPEVTLETSMGSFTVELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGPKFEDEIKPELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTIFGRVCQGMEIIKRLGSVQTDNNDRPIHDVKILRTSVKD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1214 183 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 34 181 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 28 181 IPR044666 -
Mibi02g1214 183 SUPERFAMILY Cyclophilin-like 30 181 IPR029000 -
Mibi02g1214 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 140 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 Gene3D - 10 183 IPR029000 -
Mibi02g1214 183 PIRSF Peptidylpro_ismrse 14 183 IPR024936 GO:0003755
Mibi02g1214 183 FunFam Peptidyl-prolyl cis-trans isomerase 21 183 - -
Mibi02g1214 183 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 180 IPR002130 GO:0000413|GO:0003755
Mibi02g1214 183 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1214 Mibi-ChrMibi02 11984401 11987123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1214 31 181 U-box Gene Family AT5G67530 49.669 4.60e-50 168