Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1207 ATGGAACCAACAACCCAAAACACAAACACTTTCAACAACCCATCATCAAAGGAAGAAGAACAAGACGACCAAAAGGAAGCCATGTTCGAGAAAGCCTTAACCCCCAGCGACGTCGGAAAACTCAACCGACTTGTCATCCCAAAGCAGCACGCCGAGAAGTACTTCCCACTAGGCGGCGGCGGCGCCGACAGCAAGGGAGTGTTACTGAGTTTCGAGGACGAGTCAGGGAAGTGTTGGCGATTCCGATACTCTTATTGGAACAGTAGTCAAAGTTACGTGTTGACCAAAGGTTGGAGCCGTTATGTCAAAGACAAACGCCTTGATGCCGGCGACGTCGTTTCCTTCCACCGCCACCTCTCTGATTCCCACCGCCTTTTTATCTTTTGGCGCCGCCGCCACCCTCTTCATCATGCCACCCCTACGGTCACCAGAGGGGCCCACACCGCCGTCTCCGTCGGCTGGACCACCACCACCGCCACCTCACCTTTTTATTCGGGCCATAATCAGCCTTTGCCACCATACCAACCTCAAACCATTCATGCACCAGGTAGAGGTTTAGGGGCTGAGAGGACGGTGGTGGGAAATAGTTCAGGTAAGGTACTGAGACTGTTCGGAGTGAACATGGAATGCCAAGCAGAAGAAGATGAATCAGGACCGTCCACATCGCAGAACTCATCCAACGTCTCATCTTCATCTACCCTTAACCATAACTTCTACCATTATGATGATTATCCTCATCCTAACTCATATGCTTCCACCAGTCCTCACCCCCACCACATGGTACGTCAACAATCATACTTCTGA 804 0.5137 MEPTTQNTNTFNNPSSKEEEQDDQKEAMFEKALTPSDVGKLNRLVIPKQHAEKYFPLGGGGADSKGVLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVSFHRHLSDSHRLFIFWRRRHPLHHATPTVTRGAHTAVSVGWTTTTATSPFYSGHNQPLPPYQPQTIHAPGRGLGAERTVVGNSSGKVLRLFGVNMECQAEEDESGPSTSQNSSNVSSSSTLNHNFYHYDDYPHPNSYASTSPHPHHMVRQQSYF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1207 267 FunFam B3 domain-containing protein 22 141 - -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 247 267 - -
Mibi02g1207 267 Gene3D - 17 140 IPR015300 -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 16 30 - -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 211 234 - -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 1 32 - -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 214 234 - -
Mibi02g1207 267 Pfam B3 DNA binding domain 29 132 IPR003340 GO:0003677
Mibi02g1207 267 SMART B3_2 29 132 IPR003340 GO:0003677
Mibi02g1207 267 SUPERFAMILY DNA-binding pseudobarrel domain 25 133 IPR015300 -
Mibi02g1207 267 MobiDBLite consensus disorder prediction 1 15 - -
Mibi02g1207 267 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 12 225 IPR044800 GO:0003700
Mibi02g1207 267 CDD B3_DNA 28 123 IPR003340 GO:0003677
Mibi02g1207 267 ProSiteProfiles B3 DNA-binding domain profile. 29 133 IPR003340 GO:0003677
Mibi02g1207 267 MobiDBLite consensus disorder prediction 246 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1207 Mibi-ChrMibi02 11930712 11931967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1207 22 222 RAV Transcription Factor Family AT5G06250 52.995 9.74e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi02g1207 B3 1.6e-28 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1207 02 11930712 11931967 Mibi06g2078 06 41335563 41336887 CCT
Mibi02g1207 02 11930712 11931967 Mibi02g1207 02 11930712 11931967 ECH