Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1203 ATGGGACGCGTTCGCACGAAAACGGTGAAGAAGTCATCTCGCCAAGTGATAGAGAAGTATTACTCTCGAATGACCTTGGATTTCCACACCAACAAGAAAATCCTCGAGGAGGTTGCTCTCATTCCCTCCAAGAGGCTCCGCAATAAGATTGCCGGATTCTCCACTCACCTCATGAAGAGGATCCAGAAAGGTCCCGTTCGAGGCATATCCCTGAAGCTTCAAGAGGAGGAACGCGAGCGCAGAATGGATTTCGTGCCCGATGTTTCTGCGATTAAGACGGATCAGATTGAGGTGGATAAGGAGACTCTTGATATGCTTGGCGCTCTTGGCATGGCCGATATTCCTGGCATTGTTCAGGTTGATCCTGTTCCTGTTCAGCAATCCTTTGGATTTGGCCGCGGTGCTGGTTTTGGTGGCGCCGCCAGGAGATCAATGCGAAGAACAGAAGCAGGGGAAACATTTTGGCACAGGCAGCACTCACAGTCACCCAACACATCCCATTGA 504 0.5079 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLGALGMADIPGIVQVDPVPVQQSFGFGRGAGFGGAARRSMRRTEAGETFWHRQHSQSPNTSH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1203 167 MobiDBLite consensus disorder prediction 137 167 - -
Mibi02g1203 167 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Mibi02g1203 167 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi02g1203 167 FunFam 40S ribosomal protein S17 1 62 - -
Mibi02g1203 167 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Mibi02g1203 167 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi02g1203 167 PANTHER 40S RIBOSOMAL PROTEIN S17 1 127 IPR001210 GO:0003735|GO:0005840|GO:0006412
Mibi02g1203 167 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1203 Mibi-ChrMibi02 11896118 11897083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1203 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 81.818 4.04e-79 229