Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1177 ATGGCGACATACTTCCATGGAAATTCAGAAATCCAGGCACCTGACGGCGGCCTCCAAACCCTTATACTCATGAACCCAAGCTACATCCAATACTCCGACACACCTCCGCCTCCGCAGCCGCCATCTCATCCTCCCGGCAACCTCGTCTTCCTCAATCCCCCCAACAGCAACAACAACAACTCCCTCCCTCCACAAACTCTACACCACGCGCCGCCGCCTCACACCCAACAATTCGTGGGCATCCCCCTCCCCTCCGCCGACCAATCCATGCACCACCACCACCACCACCATGATGTCTCTGCCCTGCATGGATTCGTGCCACGCATGCAGTACAACCTTTGGAGCACAGTTAATAACTCCAACACGGCGGCGAGTGATACCCCACGCGCTCAACAGGGTCTCTCCCTAAGCCTCTCTTCTCAGCAGGCAGGGATGGGGTCTTCGTCACAGGGTCTTCACGCGCCGGCTATGTCAGGGGATGATGTGCGTGGGTCTTCTTCTTCGGCTTCTGCTGTTACTAATAATGGCGTTTCAGGGATTCAGAGCGTTCTTCTGGGCTCTAAATACTTGAAGGCTGCTCAGGAACTTCTTGACGAGGTCGTTAATGTCAACGATGGGATTAAGAGTGAAATTGCAAAGAAAAGTAGCAGCCAGACAAAGACTGTTAAAGAGTCTCCCACGGCGCCGAGTGGCGACGGTTCACCCGCCGGGGATGGTGGCGCCGCCAAGCCCAGCTCTGAGCTCTCAACTGCTGAGAAACAAGATGTTCAGATGAAGAAGGCCAAGTTAATCAGCATGCTTGACGAGGTGGAACAGAGGTACAGGCAGTATCATCATCAGATGCAGATAGTGAGTTCTTCGTTTGAGCAAGCGTCTGGGATTGGGTCGGCGAGGACATACACTGCACTGGCACTTCAAACGATATCGAAGCAGTTTAGGTGTTTGAAAGATGCCATAATGGGCCAAATTAGAGCTGCTAATAAGAGTTTAGGAGAGGAAGATGGGTTTGGTACCAAAATGGAGGGTTCGAGGCTCAAATATGTGGATCATCATCTTCGCCAACAACGAGCTCTTCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGTTTGCCTGAAAGATCCGTCTCTGTTCTTCGCGCTTGGCTCTTCGAGCACTTCCTCCACCCTTACCCCAAGGACTCGGACAAACACATGCTTGCAAAGCAAACAGGGCTCACTAGGAGCCAGGTCTCAAATTGGTTCATAAATGCGCGAGTCAGATTGTGGAAACCGATGGTGGAGGAAATGTACACGGAGGAGATGAAGGAGCATGAACAGAATGGAGGGGATGAGAAATCAAGCAAGAGTGGTGAAGATCCTTCTGCTATGGCATCCTCACAAGAGATATCTCCTGCCTCTGCCACTGAACCCAAAAGCTTGAGTTTCAAACAAGACGTTTCTACAAACCCAAATACTCCAACAGTTTCAGTATCTCCACCATCAACATCACCAGTTGGAGGACATAATGCCAGAAACCACCCAGGGTTCAGCTTCATGGGCACTTCAGAGCTAGATGGGATTGCACAACCAAGTCCCAAGAAACCAAGGAACCATGAGATTCTTCAGTCACAGATTAACGTTGATATGAAGCCTGATGATGCAGGGAATGGTCAAATCTCTATGAAATTTGGGGATGAGAGGCAGAGCAGAGATGGGTATTGTTTCATGGGAAATCAGACGAACTTCATTGGCGGATTTGGGCAATACCCAATTGCAGAAATTGATAGGTTTGAGGCAGAGCAATTCACACCAAGGTTCTCGGGTAATAATGGGGTTTCTCTCACTCTTGGTCTTCCACACTGTGACTCATTATCAGCAGCAACACATCAAACATTTCTTCCAAACCAGAGCATACAACTTGGGAGGAGGATGGAGCTGGGTGAACCAAACGAGTTTGGTGGCATAAACACTTCGAATGCACTCTCTTCAGCTGCATTTGAGAATATGAATATGCAGAACCCAAAGAAGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCTTGA 2058 0.4966 MATYFHGNSEIQAPDGGLQTLILMNPSYIQYSDTPPPPQPPSHPPGNLVFLNPPNSNNNNSLPPQTLHHAPPPHTQQFVGIPLPSADQSMHHHHHHHDVSALHGFVPRMQYNLWSTVNNSNTAASDTPRAQQGLSLSLSSQQAGMGSSSQGLHAPAMSGDDVRGSSSSASAVTNNGVSGIQSVLLGSKYLKAAQELLDEVVNVNDGIKSEIAKKSSSQTKTVKESPTAPSGDGSPAGDGGAAKPSSELSTAEKQDVQMKKAKLISMLDEVEQRYRQYHHQMQIVSSSFEQASGIGSARTYTALALQTISKQFRCLKDAIMGQIRAANKSLGEEDGFGTKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEEMKEHEQNGGDEKSSKSGEDPSAMASSQEISPASATEPKSLSFKQDVSTNPNTPTVSVSPPSTSPVGGHNARNHPGFSFMGTSELDGIAQPSPKKPRNHEILQSQINVDMKPDDAGNGQISMKFGDERQSRDGYCFMGNQTNFIGGFGQYPIAEIDRFEAEQFTPRFSGNNGVSLTLGLPHCDSLSAATHQTFLPNQSIQLGRRMELGEPNEFGGINTSNALSSAAFENMNMQNPKKFAAQLLPDFVA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1177 685 MobiDBLite consensus disorder prediction 122 154 - -
Mibi02g1177 685 CDD homeodomain 369 430 IPR001356 GO:0003677
Mibi02g1177 685 Gene3D - 372 451 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 212 228 - -
Mibi02g1177 685 SUPERFAMILY Homeodomain-like 370 436 IPR009057 -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 28 74 - -
Mibi02g1177 685 Pfam Homeobox KN domain 386 425 IPR008422 GO:0003677|GO:0006355
Mibi02g1177 685 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 90 456 - -
Mibi02g1177 685 SMART HOX_1 369 433 IPR001356 GO:0003677
Mibi02g1177 685 ProSiteProfiles 'Homeobox' domain profile. 366 429 IPR001356 GO:0003677
Mibi02g1177 685 MobiDBLite consensus disorder prediction 438 512 - -
Mibi02g1177 685 FunFam BEL1-like homeodomain protein 9 372 434 - -
Mibi02g1177 685 Pfam Associated with HOX 183 320 IPR006563 -
Mibi02g1177 685 Coils Coil 253 273 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 31 48 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 456 506 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 49 65 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 122 173 - -
Mibi02g1177 685 SMART prehox3 178 321 IPR006563 -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 212 254 - -
Mibi02g1177 685 MobiDBLite consensus disorder prediction 438 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1177 Mibi-ChrMibi02 11625345 11627675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1177 1 685 Homeobox Transcription Factor Family AT2G35940 52.446 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi02g1177 POX 4.1e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1177 02 11625345 11627675 Mibi06g2041 06 40883936 40886623 CCT
Mibi02g1177 02 11625345 11627675 Mibi02g1177 02 11625345 11627675 ECH