Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1165 ATGGCCATGCAAGCTGTTTATTTCAAAGAAGGTGAAGGTACTACCCATAATTCCGCCGGCCATATGTCATCTGTAACTTCGGCCCCCTGGTGGAGCACCTTAGGGTCTCAACCAATTTTAGGTGAGTCTTGTGGCCAAATGAAACCTTTTTCTCTGGAGATTCCTAACTATGTAGACCAACTTGCTGCCAATAAGCAAGCAGGAAGAGGAGCTGAACAAGTGTTTGATAAAGGACACACCACTCAGTTCGCTATCTTTTCTGATGATTGTAAAATGTCAGGTGATCAGAAGTCTCAAACTGGCATATCACTTCACCCATCGGTTCCTGATCCTCACAATCGTGTTGAGCTGGGAATTAACCAGCCTATGATCTGTGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCAACTTATGGACCTCAAATTCCGGGCCGTATGATGCTGCCACTTAACATGGCATCTGATGATGGACCAATTTATGTTAATGCTAAGCAGTACCATGGAATCATCCGACGTCGGCAGTCCAGAGCAAAGGCTGTGATGGAGAATAAATTGACTAAACGTCGCAAGCCTTATATGCATGAATCACGCCATCTCCATGCAATGCGTCGCCCAAGAGGATGCGGTGGTCGGTTCCTGAACACGAAAAGCTTGAATGCAAGAGGTGGAAGTGAAGGGAACAAAACTGGTGATGGTCAATTGCAGTCCCCTGGTTCTCAGAGCTCTGAAGTGCTGCAATCATCAAAGGAAACAAGTGGCAGCAGCCCGCACATGTGTGGGTCAGAGGTCACTAGCATGTACATGAGAGGAGGTCTTGATCATGGCTTCACGTTCACCCATCTTGGACCATCTGTTCATCAAACTCTTGCAGGCATTATGGGTGGTCATGGTGGTAGTGGCGGCGGCATGGCTATGGCCACCAAATGGGTTGCAGCATCAGGTAAATGCTGCAGCCTTGAAGTTTGA 975 0.4697 MAMQAVYFKEGEGTTHNSAGHMSSVTSAPWWSTLGSQPILGESCGQMKPFSLEIPNYVDQLAANKQAGRGAEQVFDKGHTTQFAIFSDDCKMSGDQKSQTGISLHPSVPDPHNRVELGINQPMICAKYPYMDQFYGLFSTYGPQIPGRMMLPLNMASDDGPIYVNAKQYHGIIRRRQSRAKAVMENKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKSLNARGGSEGNKTGDGQLQSPGSQSSEVLQSSKETSGSSPHMCGSEVTSMYMRGGLDHGFTFTHLGPSVHQTLAGIMGGHGGSGGGMAMATKWVAASGKCCSLEV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1165 324 MobiDBLite consensus disorder prediction 220 264 - -
Mibi02g1165 324 MobiDBLite consensus disorder prediction 207 265 - -
Mibi02g1165 324 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 161 215 IPR001289 GO:0003700|GO:0006355
Mibi02g1165 324 Gene3D - 158 220 - -
Mibi02g1165 324 SMART cbf3 157 218 IPR001289 GO:0003700|GO:0006355
Mibi02g1165 324 ProSiteProfiles NF-YA/HAP2 family profile. 158 218 IPR001289 GO:0003700|GO:0006355
Mibi02g1165 324 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 72 260 IPR001289 GO:0003700|GO:0006355
Mibi02g1165 324 PRINTS CCAAT-binding transcription factor subunit B signature 161 183 IPR001289 GO:0003700|GO:0006355
Mibi02g1165 324 PRINTS CCAAT-binding transcription factor subunit B signature 192 215 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1165 Mibi-ChrMibi02 11501070 11504673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1165 1 324 CCAAT-HAP2 Transcription Factor Family AT3G05690 39.377 7.88e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi02g1165 CBFB_NFYA 5e-26 No_clan