Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1154 ATGGGTAACAACTGTGTTGGATCAAGAATCTCCAGGGATACATTATTTCCCTCTATTTCCAGTTCATCTTGGTGGTCACGACCAACTGGGGATACAGTTTCTCCTACCAGTAAATCATCGTCTAGAAGCGAAGGTACAAATGTATCAGAGACTGTTCAAAACATCCCACCCGCGGTATTGAGAATTGATAAGGTGGAGATGAAACTGAAACCAATACAGGAGATAAAACCACCTCAGCCTCAAAAACAGGACGAAGAGATTGTATCTCCCAAGCCACCAATGGAGGAATCAAGACTACCCCAGACGGTGGAGCTTAGTCACAAGGAAGAGGGTGGACCGATTCCGATGAGTGTACAAAAGGAAGAGACTATTCCACAAGTGGAACCCACAAAACCAAAGAAGTCCCACCAGGTGAAGAGGCTGTCATCTGCTGGGCTGCGAGCAGATTCTGTTTTGCAGACAAAAACTGGTCATCTTAAGGAGTTTTATAAGCTGGGGCGAAAGCTTGGACATGGGCAATTTGGAACGAGTTTCCTTTGTGTGGAGAAAGGTACAGGTAAAGAATATGCCTGCAAGTCCATTGCTAAGAGAAAATTACTGACATATGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCATTTAGCAGGAAGCCCAAATGTGATATCTATAAAAGGGGCTTATGAGGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGCAGGGGGTGAGCTTTTTGATAGGATTGTAGAAAGAGGACATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTGTAGTTAGTGTTATAGAAGCTTGTCACTCCCTTGGAGTTATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTTAGTAAGGATGAAGACTCCCCCCTTAAGGCCATTGATTTTGGATTGTCTACATTTTTCAAACCAGGACAAACTTTCTCAGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTAATTATTTATATTCTTCTATGTGGGGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAGGAGGTTTTGGACGGAAAGCTTGATTTCTCATCCGATCCTTGGCCTAAGATCTCAGACAGTGCTAAAGACTTGGTGAGGAAGATGCTTACTAGAGATCCAAGAAAACGGATAACTGCTCATGAAGTTCTCTGTCATCCATGGATACGAATTGATGGAGAGGCTCCAGACAAACCTCTTGATTCAGCAGTATTGAGTCGCCTGAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCCGAAGAAGAAATTGCCGGATTGAAAGAAATTTTTAAGATGATAGATTCAGACAATAGTGGTCAAATTACATATGAAGAACTAAAGAATGGACTAAAAAGATTTGGTGCTGATCTCAATGAATCAGAAATACATGATCTAATGCAAGCCGCAGATGTTGATAACAGCGGAACAATAGACTACAAAGAATTCATAGCAGCCACATTACATTTAAATAAAATTGAGAGGGAAGACCACTTAGTTGCAGCCTTCTCGTACTTTGATAAAGATGGAAGCGGCTATATCACACCAGATGAGCTTCAACAAGCTTGCCAAGAATTCGGCATAGAAGATTTCCACTTAGAAGATATTATCAGAGAAGCAGATCAAGATAATGATGGGCAAATAGATTACAAGGAATTTGTGGCAATGATGCAGAGAGGCAACACAGAGATGGGGAAAACAGGTCAAAGAGGTAGCAATAGATTTAAGATTGGATATAGAGAGGCCCTATCAGTGTGTTAA 1887 0.4181 MGNNCVGSRISRDTLFPSISSSSWWSRPTGDTVSPTSKSSSRSEGTNVSETVQNIPPAVLRIDKVEMKLKPIQEIKPPQPQKQDEEIVSPKPPMEESRLPQTVELSHKEEGGPIPMSVQKEETIPQVEPTKPKKSHQVKRLSSAGLRADSVLQTKTGHLKEFYKLGRKLGHGQFGTSFLCVEKGTGKEYACKSIAKRKLLTYEDVEDVRREIQIMHHLAGSPNVISIKGAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTVVSVIEACHSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGQTFSDVVGSPYYVAPEVLCKCYGPEADVWSAGVIIYILLCGVPPFWAETEEDIFKEVLDGKLDFSSDPWPKISDSAKDLVRKMLTRDPRKRITAHEVLCHPWIRIDGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDSDNSGQITYEELKNGLKRFGADLNESEIHDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEDIIREADQDNDGQIDYKEFVAMMQRGNTEMGKTGQRGSNRFKIGYREALSVC 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1154 628 ProSiteProfiles EF-hand calcium-binding domain profile. 574 605 IPR002048 GO:0005509
Mibi02g1154 628 MobiDBLite consensus disorder prediction 1 55 - -
Mibi02g1154 628 FunFam Calcium-dependent protein kinase 1 165 248 - -
Mibi02g1154 628 ProSiteProfiles EF-hand calcium-binding domain profile. 536 571 IPR002048 GO:0005509
Mibi02g1154 628 ProSitePatterns EF-hand calcium-binding domain. 549 561 IPR018247 -
Mibi02g1154 628 SMART efh_1 468 496 IPR002048 GO:0005509
Mibi02g1154 628 SMART efh_1 574 602 IPR002048 GO:0005509
Mibi02g1154 628 SMART efh_1 540 568 IPR002048 GO:0005509
Mibi02g1154 628 SMART efh_1 504 532 IPR002048 GO:0005509
Mibi02g1154 628 SUPERFAMILY Protein kinase-like (PK-like) 162 422 IPR011009 -
Mibi02g1154 628 Gene3D - 446 605 - -
Mibi02g1154 628 SUPERFAMILY EF-hand 460 601 IPR011992 -
Mibi02g1154 628 FunFam Calcium-dependent protein kinase 1 429 603 - -
Mibi02g1154 628 Pfam Protein kinase domain 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1154 628 PANTHER SERINE/THREONINE-PROTEIN KINASE 153 595 - -
Mibi02g1154 628 FunFam Calcium-dependent protein kinase SK5 249 433 - -
Mibi02g1154 628 ProSiteProfiles EF-hand calcium-binding domain profile. 500 535 IPR002048 GO:0005509
Mibi02g1154 628 MobiDBLite consensus disorder prediction 1 54 - -
Mibi02g1154 628 SMART serkin_6 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1154 628 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Mibi02g1154 628 Gene3D Phosphorylase Kinase; domain 1 165 248 - -
Mibi02g1154 628 Gene3D Transferase(Phosphotransferase) domain 1 249 445 - -
Mibi02g1154 628 MobiDBLite consensus disorder prediction 72 115 - -
Mibi02g1154 628 ProSitePatterns EF-hand calcium-binding domain. 583 595 IPR018247 -
Mibi02g1154 628 ProSiteProfiles Protein kinase domain profile. 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1154 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Mibi02g1154 628 CDD STKc_CAMK 162 420 - -
Mibi02g1154 628 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Mibi02g1154 628 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Mibi02g1154 628 Pfam EF-hand domain pair 469 529 IPR002048 GO:0005509
Mibi02g1154 628 Pfam EF-hand domain pair 540 600 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1154 Mibi-ChrMibi02 11400942 11403928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1154 1 622 EF-hand Containing Proteins AT3G10660 65.850 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi02g1154 Pkinase 2.5e-73 CL0016