Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1152 ATGTTTTGTGGCGTTGTGGATCAAAAGAAGGACACCCTTCGACCACTATTGCATTGTGGAGTTGGGGTGCGGATCCATTCTCTGGGGTGCCGATTCAAGGCTCGATCTCCTCTTGATGTGTGCTCTCTTCGTTTCTTGATCTCTTTCCTGGAGCTTTCCAATTATCAATGGAGTTTGGGTGATGTGTTGAAGGTTCCGGACATGGAAGACAAAAACAATGAAAGTCACATGACATCAGCTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGATGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAAGCAATCCTTCAACGGTTACCACTTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGCCAGAGGAGCTCCCAGTGCCCCATGTGTTGGCAGTTTATTGGTTTCAAGGATTCGACCAGTCAAGAATTGTTTGAGGCAGTGGTTCATGAAAGGAATTTGAGAGCTAGTTCCTCAAGAAATGCAACAGTTCTCCATCATCTGGCTTTCGGTGATTTTGACTTGCAGCATTTGTCCATGGGAGCAAGTGAAGCAGATATTGAGGCGAGGATAATTCAACATTTAGCTGCTGCCACAGTCATGGGAAGAGCCCGCCACCTTGGTCGGAGAGAAGGAAATAGGACTAGGCCATATCCTCATGGTCGTCCTCCCTTCGTAGTGTCCTCAACTCCTTCGCATGGCGCTGTTTCGGCTGCTGAAGGGGGTACTGAACCAACTGCAATTCCTGTAGGAAATCCATCTATCCCACTTACATCTGAAGGAGAGGAACCATCACAGCAGATCCCGAGCCGCCAAACACAGAGTTCTTTACCTTCTGGATCTACTGTCATGGCGAGAAATCAGCAAGGGATTCTTTTTAATGATAGAAGCTCTTCTGTCCAATCTGTACAACCTGACCAGGGCAGAGCAGGGCCATCAGAACTTCAGTCATTTTCCGAGTCTCTGCGATCCAGACTTGGTTCGGTGTCTATGAGGTATGAGTACTTTGGAAGCCAGTCTTTGGCTGTTGTGCGAAAAGCTGTTCTCTCGTAG 1071 0.4762 MFCGVVDQKKDTLRPLLHCGVGVRIHSLGCRFKARSPLDVCSLRFLISFLELSNYQWSLGDVLKVPDMEDKNNESHMTSAAAFVEGGIQEACDDSCSICLEDFSESNPSTVTTCKHDFHLQCILEWCQRSSQCPMCWQFIGFKDSTSQELFEAVVHERNLRASSSRNATVLHHLAFGDFDLQHLSMGASEADIEARIIQHLAAATVMGRARHLGRREGNRTRPYPHGRPPFVVSSTPSHGAVSAAEGGTEPTAIPVGNPSIPLTSEGEEPSQQIPSRQTQSSLPSGSTVMARNQQGILFNDRSSSVQSVQPDQGRAGPSELQSFSESLRSRLGSVSMRYEYFGSQSLAVVRKAVLS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1152 356 SUPERFAMILY RING/U-box 88 144 - -
Mibi02g1152 356 SMART ring_2 96 136 IPR001841 -
Mibi02g1152 356 MobiDBLite consensus disorder prediction 264 287 - -
Mibi02g1152 356 Pfam Ring finger domain 94 136 IPR001841 -
Mibi02g1152 356 MobiDBLite consensus disorder prediction 302 324 - -
Mibi02g1152 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 144 IPR013083 -
Mibi02g1152 356 ProSiteProfiles Zinc finger RING-type profile. 96 136 IPR001841 -
Mibi02g1152 356 MobiDBLite consensus disorder prediction 214 287 - -
Mibi02g1152 356 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 74 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1152 Mibi-ChrMibi02 11389506 11393553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1152 93 144 C3H Transcription Factor Family AT4G00335 48.077 2.78e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1152 02 11389506 11393553 Mibi02g1152 02 11389506 11393553 ECH