Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1148 ATGGAGAAGACAAGTATGATGAGTAGTAGTGGGTTGGGGAGGACGAAATCGGAGCAGCTGGAGGAGGAGTTAACGTTGTCGGTGATGGACAGCGGGGGAAGCGGAGGAGGCCTAGGGAGGAAGTCAAGTAGGAGGATGTCGCCTGGAGGGAAGAACAACAGCCAGAGCCAGATAAGGAAGAGCAGGAGTGCTCAGATTAAGGTTGATTTGGATGACGTTGGCAGTGGCGCCGCCCTCAGCCGGGCTTCCAGCGCCAGCTTGGGCCTCTCCTTCTCCTTCACCGGCTTCACCCTCACCCCTGATGATCTCTCTGATTCTAATAATAAGCCCTTCAGGGACCAACATATTCCGGAGGATATTGAAGCTGGAACTTGCCACTTCAAGTTTCAAACAGAACCCACTCTGCCTGTTTTTCTCAAGTTCAAGGATGTAAGCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGAATTACTGGTTCAGTGAATCCAGGTGAAGTTTTGGCACTGATGGGACCCTCAGGGAGTGGAAAGACTACCCTTTTGAATCTTCTAGGAGGCCGGTTGGTTCAGTCCTCTGCTGGTGGTTCTATCACTTACAATGACCAGCCATATAGCAAATATCTCAAAAGCAAGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCGCACCTTACTGTGAAAGAAACACTAACATACGCAGCCCGTCTACGTCTCCCCAATACATTCACAAAGGACCAGAAGGAAAAACGAGCCTTGGATGTTATCTATGAGCTTGGCTTAGAAAGGTGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTCTTTTTGGATGAGCCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTATTTCACAAATTTGATAAGTTGATCCTACTGGGAAGAGGCAGCTTGCTTTACTTTGGTAAAGCATCTGAAGCAATACCTTATTTCCAATCTATAGGTTGCTCCCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTAGACCTCGCAAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTAGACGATAAAGTGCAGATGGGAAATGCAGAAGTTAGAACAAAGAATGGGAAACCATCGCCAACAATGGTACAAGAGTATCTAGTAGAAGCATACGAGACTCGAGTTTCCGAAACAGAAAAGAGAAAGCTGATGGTTCCCATCCCACTTGATGAATCACTGAAGTCTAAGGTTTGTTCACCTAAAAGACAATGGGGTGCAAGGTGGTGTGAGCAGTATTCCATACTGTTCTGCAGAGGAATAAAAGAAAGGAGGCACGACTATTTCAGCTGGTTAAGAATCACTCAAGTTCTTTCTACTGCAGTCATATTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGTCTTCAAGACCAGGCTGGGTTACTTTTCTTCATAGCAGTGTTCTGGGGATTCTTTCCAGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGATATGTACAGGCTAAGTGCATACTTTGTGGCTAGGACTACAAGTGATATCCCACTGGACTTAATACTACCAATACTGTTCTTGCTGGTTGTTTATTTCATGGCCGGTCTGAGACTAAGTGCCGACTCCTTCTTCTACAGCATTCTCACTGTCTTCCTCTGCATATTGGCAGCTCAGGGACTTGGACTCGCTATTGGGGCCACATTAATGGACTTGAAGAAAGCAACTACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTTGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGATACATTTCGTTTAACTACCACACATACAAGCTTTTGCTGAAAGTGCAATATGGAGGGCTCTCGAGAGGAATAAATGGGATGAGAATTGATGATGGTTGGACGGAGGTTGGTGCTCTCATGGCAATGGTTTTTGGTTATCGTTTATTGGCTTACCTTTCGTTACGGCGGATGAAACTTCCATGCGGAGCTTAG 2208 0.4515 MEKTSMMSSSGLGRTKSEQLEEELTLSVMDSGGSGGGLGRKSSRRMSPGGKNNSQSQIRKSRSAQIKVDLDDVGSGAALSRASSASLGLSFSFTGFTLTPDDLSDSNNKPFRDQHIPEDIEAGTCHFKFQTEPTLPVFLKFKDVSYKVVIKGMTTSEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLVQSSAGGSITYNDQPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPNTFTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGRGSLLYFGKASEAIPYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELDDKVQMGNAEVRTKNGKPSPTMVQEYLVEAYETRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDIPLDLILPILFLLVVYFMAGLRLSADSFFYSILTVFLCILAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQYGGLSRGINGMRIDDGWTEVGALMAMVFGYRLLAYLSLRRMKLPCGA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1148 735 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 86 723 - -
Mibi02g1148 735 Pfam ABC transporter 162 313 IPR003439 GO:0005524
Mibi02g1148 735 MobiDBLite consensus disorder prediction 1 64 - -
Mibi02g1148 735 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 139 385 IPR003439 GO:0005524
Mibi02g1148 735 MobiDBLite consensus disorder prediction 46 63 - -
Mibi02g1148 735 MobiDBLite consensus disorder prediction 1 15 - -
Mibi02g1148 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 377 IPR027417 -
Mibi02g1148 735 CDD ABCG_EPDR 136 367 - -
Mibi02g1148 735 Pfam ABC-2 type transporter 481 689 IPR013525 GO:0016020|GO:0140359
Mibi02g1148 735 FunFam ABC transporter G family member 22 149 379 - -
Mibi02g1148 735 Gene3D - 138 378 IPR027417 -
Mibi02g1148 735 SMART AAA_5 171 362 IPR003593 -
Mibi02g1148 735 ProSitePatterns ABC transporters family signature. 285 299 IPR017871 GO:0005524|GO:0016887
Mibi02g1148 735 Pfam ABC-2 type transporter 342 441 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1148 Mibi-ChrMibi02 11360427 11368789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1148 161 399 Calmodulin-binding Proteins AT2G36910 28.980 2.87e-15 78.2