Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1135 ATGTTAAAGAAAAGTAGGGTTTCATGTTCGTTCTCTTCTTCCGTGAATATCATCTGCGCCGCTCGCATTCCTGTGCATCTCGCATTCTTTGCCTTCAGTCGGATCAGGATGGAGTCTCAGGTGAAGCATGCCGTGGTTGTTAAGGTGATGGGTCGTACTGGATCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACAGGTATATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACCCTACTTGAGTCTGAAAGAGAAGCAAGGAGATTGCGTTAG 306 0.4673 MLKKSRVSCSFSSSVNIICAARIPVHLAFFAFSRIRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1135 101 SUPERFAMILY Nucleic acid-binding proteins 37 101 IPR012340 -
Mibi02g1135 101 PANTHER 40S RIBOSOMAL PROTEIN S28 37 101 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mibi02g1135 101 FunFam 40S ribosomal protein S28 35 101 - -
Mibi02g1135 101 Hamap 30S ribosomal protein S28e [rps28e]. 37 101 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mibi02g1135 101 ProSitePatterns Ribosomal protein S28e signature. 92 100 IPR028626 -
Mibi02g1135 101 CDD S1_S28E 42 101 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mibi02g1135 101 Pfam Ribosomal protein S28e 40 100 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mibi02g1135 101 Gene3D - 36 101 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1135 Mibi-ChrMibi02 11231850 11233057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1135 37 101 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 90.769 7.15e-37 117