Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1105 ATGGCAATAAGCGAATCTGGTGCATATCGTGGGGGCACGTACAGCCCCGTAAGCATGTTTTGCTGCGGAGGTAAAGAGGAAGAGAGCCACGGCCCACCTGACCCTTCACCCTTCAAAGGTGGTAATGCCTATGGTGCAGGGGGTGACAGAGGAGAGCCAAGAAGAAATGTTGCCAGGGCTGGTGCTCCCCAAAAAGCATTGCCGATTGAGACCCCTGTAATGACATTGGCCGAATTGAATAGGGTAACGGGTAACTTTGGACCAAACAATTTGATTGGAGAAGGTTCGTACGGAAAAGTGTTTTATGCCAAGTTAAGCGATGGTCGGCAGGTAGCAATCAAGAAGCTGGACACCAGTGGTACTTCCCCAGAAGACGACGCAGACTTTAAAGCTCAGTTATCTGTGGTTTCAAGGCTGAAGCACGATCACTTTTTGGCTTTGATTGGATATTGTTTGGAGTCAAGAAACAGAATTTTGGTTTATGAGCATGCAATTTTGGGTTCTTTGCACGACGTGTTACATGGAAGGAAAGGTGTGCAGGGGGCAGAGCCAGGTCCAGTTCTGAGCTGGAACCAGAGAGTAAAGATCGCACTAGGAGCAGCAAAAGGGCTCGAGTTTCTTCATGAAAAGGTTCAGCCTTCCGTAGTCCATCGTGATGTTAGATCCAGCAATGTCTTGCTCTTCCGTGACTATGATGCCAAGATTGCTGATTTCAGCTTGACCAGTCAAAGTTCGGACACAGCAGCTCGCCTCCATTCAACTAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAAAAAAGTGATGTCTACAGTTTTGGGGTTGTTCTCTTAGAACTCTTGACAGGAAGAAAACCAGTAGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTTGATCCCAAACTCAACAGTGACTGCCCCCCAAAGGCAGTTGCTAAGTTGGCGGCGGTTGCGGCATTGTGTGTTCAGTATGAGGTTGACTTCCGGCCAAACATGACCATTGTGGTGAAAGCTTTGCAGCCACTTCTGAATGCAAAACCAGCTGGCCCATAA 1131 0.4845 MAISESGAYRGGTYSPVSMFCCGGKEEESHGPPDPSPFKGGNAYGAGGDRGEPRRNVARAGAPQKALPIETPVMTLAELNRVTGNFGPNNLIGEGSYGKVFYAKLSDGRQVAIKKLDTSGTSPEDDADFKAQLSVVSRLKHDHFLALIGYCLESRNRILVYEHAILGSLHDVLHGRKGVQGAEPGPVLSWNQRVKIALGAAKGLEFLHEKVQPSVVHRDVRSSNVLLFRDYDAKIADFSLTSQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNSDCPPKAVAKLAAVAALCVQYEVDFRPNMTIVVKALQPLLNAKPAGP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1105 376 MobiDBLite consensus disorder prediction 21 62 - -
Mibi02g1105 376 Pfam Protein tyrosine and serine/threonine kinase 91 365 IPR001245 GO:0004672|GO:0006468
Mibi02g1105 376 ProSiteProfiles Protein kinase domain profile. 86 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1105 376 SMART tyrkin_6 89 365 IPR020635 GO:0004713|GO:0006468
Mibi02g1105 376 FunFam PTI1-like tyrosine-protein kinase 3 165 374 - -
Mibi02g1105 376 SUPERFAMILY Protein kinase-like (PK-like) 68 365 IPR011009 -
Mibi02g1105 376 Gene3D Phosphorylase Kinase; domain 1 54 163 - -
Mibi02g1105 376 Gene3D Transferase(Phosphotransferase) domain 1 166 374 - -
Mibi02g1105 376 ProSitePatterns Tyrosine protein kinases specific active-site signature. 215 227 IPR008266 GO:0004672|GO:0006468
Mibi02g1105 376 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 48 372 - -
Mibi02g1105 376 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1105 Mibi-ChrMibi02 10952912 10955488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1105 73 372 Receptor kinase-like Gene Family AT3G58690 48.173 1.15e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mibi02g1105 PK_Tyr_Ser-Thr 1.5e-45 CL0016