Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1100 ATGGAGTTGGGGTTGAGCTTAGGGGAGGCGCCCAAGGCGTTCTCTTTTGTGGAGAAGCTCACCAAGATGCCCAGCAGCAAAGATCCTTCCTTTTGCGTACCCCTTCTCTCTCGTCTCTCCCCCACCACTTGCAATCATGAACATGGCCCTCCTCCTCCTCCTCCTCCTCCACGCCTTTCCATTCCCTGGCTCTCCCCTCCTTGTAATCCCTCTCCCCCACCCCCACTTTCTATTTCTGAAATCGTTTTGTTTTGTCTTAACATTGTGATGTTTTGTGCAATGACAGTGGGTGGCGAAGACATTTCATCAGACAGGGTCGTCACTGGGAGGGGGTTGGATGTGAACAGTGCGCCGGCTGACGTGGATGAGGCAGACGAAGACGACGCCGCCGCCCTCTCTTCTCCCAACAGCGAGATCTCCTCCTTCCACATGGACTTCCGCCTCGGCACTTACAACAGAGCCAGCGACGACGACGAAAACGGATCCAATCGTAAGAAACTCCGATTGTCCAAGCAGCAGTCCGCTTTCCTCGAAGACAGCTTCAAACAACACTCCACCCTCAATCCCAAGCAGAAGCTTGCTCTGGCCAAGCAATTAAACCTTCGTCCTCGTCAGGTGGAAGTTTGGTTCCAAAATCGACGGGCCAGGACGAAATTGAAGCAGACGGAGGTGGATTGTGAGTATCTGAAGAGATGTTGCGAGACGTTGACGGAGGAGAATAGGAGGCTACAGAAGGAGGTACAAGAATTAAGGGCTTTGAAGACATCGCAGCCGTACTACATGCAGCTCCCGGCGACCACCCTCACCATGTGTCCCTCCTGTGAAAAGGTCGTTACCAAATCTTCCGCCGCCGCCGCCGCCAGTGCTTCTCGAATCCCGGTTCCTTTGTCTCTTGCCAAGCCTGGAATGCTTCCCTTCGCCAATGCTCAAGCCCAACCTCAACAGACCCAGGCCCAGGCCCATCATATGCCTTCTTGA 978 0.5419 MELGLSLGEAPKAFSFVEKLTKMPSSKDPSFCVPLLSRLSPTTCNHEHGPPPPPPPPRLSIPWLSPPCNPSPPPPLSISEIVLFCLNIVMFCAMTVGGEDISSDRVVTGRGLDVNSAPADVDEADEDDAAALSSPNSEISSFHMDFRLGTYNRASDDDENGSNRKKLRLSKQQSAFLEDSFKQHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKTSQPYYMQLPATTLTMCPSCEKVVTKSSAAAAASASRIPVPLSLAKPGMLPFANAQAQPQQTQAQAHHMPS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1100 325 SMART halz 220 263 IPR003106 GO:0006355|GO:0043565
Mibi02g1100 325 ProSiteProfiles 'Homeobox' domain profile. 160 220 IPR001356 GO:0003677
Mibi02g1100 325 SUPERFAMILY Homeodomain-like 146 221 IPR009057 -
Mibi02g1100 325 FunFam Homeobox-leucine zipper protein 18 150 225 - -
Mibi02g1100 325 Coils Coil 226 256 - -
Mibi02g1100 325 CDD homeodomain 164 221 IPR001356 GO:0003677
Mibi02g1100 325 Pfam HD-ZIP protein N terminus 101 142 IPR006712 GO:0005634
Mibi02g1100 325 SMART HOX_1 162 224 IPR001356 GO:0003677
Mibi02g1100 325 Pfam Homeodomain 164 218 IPR001356 GO:0003677
Mibi02g1100 325 Pfam Homeobox associated leucine zipper 220 254 IPR003106 GO:0006355|GO:0043565
Mibi02g1100 325 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 114 289 - -
Mibi02g1100 325 MobiDBLite consensus disorder prediction 115 136 - -
Mibi02g1100 325 ProSitePatterns 'Homeobox' domain signature. 195 218 IPR017970 GO:0000981|GO:0006355
Mibi02g1100 325 Gene3D - 156 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1100 Mibi-ChrMibi02 10919157 10920318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1100 156 277 Homeobox Transcription Factor Family AT4G37790 81.148 1.68e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi02g1100 Homeodomain 4e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1100 02 10919157 10920318 Mibi06g1976 06 40300906 40302161 CCT
Mibi02g1100 02 10919157 10920318 Mibi02g1100 02 10919157 10920318 ECH