Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi02g1099 | ATGGGGGAAGAGACATCGGACGCGATGAACCTTGATTTGAATCTGGGTCCTGATCCAGAGCCAGCCACCAATGAATCCGTGAGCTTGGAGGATTGGATTGAAGAGCCTAGGATTAGCGAATCAGTTAGACATAGGACTCGACAGAGGTGGAGATGGCGGCATCTTCACGTTAATCCTCCTGAACCCCATCGCAGCCTTTTTATTTCACCTGAAGCAAATCGGCGTTTTATTATGGCTCCCGAAGCCCACGCTATTTCAATGCGATTGAATGAATTGTTGGCCAGCCCTGGACCTGGTAATGGAAGTGTGTTACAGGCTGGGGAAGGTAGCGTGGCAGCTGAAGAAAGAACAGAGGTGACACCCAAAGCATGTGAAACAAACAATGGTGTTTTGGAGGATGGAGCATCAGATAAGAAGGATGATGTTGAAAAGGGTAGTGGCAATGATGGGAGCTTTTTTGATTGTAATATCTGTTTGGACCTGGCTAGAGATCCTGTTGTGACTTGCTGTGGTCATTTGTTTTGTTGGCCATGCCTCTATCGGTGGCTACATGAGCATTCAGAAGCTAAGGAATGCCCAGTTTGCAAGGGAGAGGTGACCTTTAAAAATGTTACACCAATATATGGCCGTGGAAACAATGTCCGTGAACCTGAGGAATATCCTACTCTTAAAGTCCCCATTAGACCCCATGCTAGGCGTGTTGAAAGTCTGAGACAAACCATTCATCGAAATGCATTTGCATTCCCAGTGGAAGAGATGATTCGGCGTCTTGGAAGTAGATTTGACCTCTCTCGAGATGTAGGCCAGCCACACGAGACTGACAATGCCCGGGAAGCAGCTGACAGAACTACTACCTTGTTAAATAGATTTTTGACCTCTCGAGCGTTACGAAGAGAGCATATGCATGGGGCAACTGCAGATGATGCAGTGGACTTGACTCAAAACAACATTGATGGCCCTGAGGCAAGGGATAACCACCGGGCTCAATCCCTACTACTTCGAAGAACACAGTCACATAGAACATCACTTTCTTCTCTTGCATCAGCTCTGAGTTCTGCTGATAGATTTGTTGAGGCATATGTCCGTAGCCATTATATTGGTAGAAACCAAGAGCAACCTCCGCCAGTTGATGATAGAGATTCCTTTTCAAGTGTTGCTGCTGTTATACACTCAGAGAGTCAAGTAGACACTGCTGTAGAAATTGATTCCATGGTCTCTTTGTCAACATCCTCTTCCAGGAGGAGAAATGATGCATCTCGGGTTTCTGATGTGGATAGTGGAGATTCTCGGGCCCCCAGACGAAGACGTTTGAACTGA | 1317 | 0.4662 | MGEETSDAMNLDLNLGPDPEPATNESVSLEDWIEEPRISESVRHRTRQRWRWRHLHVNPPEPHRSLFISPEANRRFIMAPEAHAISMRLNELLASPGPGNGSVLQAGEGSVAAEERTEVTPKACETNNGVLEDGASDKKDDVEKGSGNDGSFFDCNICLDLARDPVVTCCGHLFCWPCLYRWLHEHSEAKECPVCKGEVTFKNVTPIYGRGNNVREPEEYPTLKVPIRPHARRVESLRQTIHRNAFAFPVEEMIRRLGSRFDLSRDVGQPHETDNAREAADRTTTLLNRFLTSRALRREHMHGATADDAVDLTQNNIDGPEARDNHRAQSLLLRRTQSHRTSLSSLASALSSADRFVEAYVRSHYIGRNQEQPPPVDDRDSFSSVAAVIHSESQVDTAVEIDSMVSLSTSSSRRRNDASRVSDVDSGDSRAPRRRRLN | 438 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi02g1099 | 438 | SUPERFAMILY | RING/U-box | 151 | 208 | - | - | |
Mibi02g1099 | 438 | MobiDBLite | consensus disorder prediction | 405 | 438 | - | - | |
Mibi02g1099 | 438 | CDD | RING-HC_AtRMA_like | 153 | 197 | - | - | |
Mibi02g1099 | 438 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Mibi02g1099 | 438 | Pfam | Zinc finger, C3HC4 type (RING finger) | 155 | 195 | - | - | |
Mibi02g1099 | 438 | MobiDBLite | consensus disorder prediction | 416 | 438 | - | - | |
Mibi02g1099 | 438 | ProSitePatterns | Zinc finger RING-type signature. | 170 | 179 | IPR017907 | - | |
Mibi02g1099 | 438 | ProSiteProfiles | Zinc finger RING-type profile. | 155 | 196 | IPR001841 | - | |
Mibi02g1099 | 438 | SMART | ring_2 | 155 | 195 | IPR001841 | - | |
Mibi02g1099 | 438 | FunFam | Zinc finger family protein | 136 | 209 | - | - | |
Mibi02g1099 | 438 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 241 | IPR013083 | - | |
Mibi02g1099 | 438 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 136 | 327 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi02g1099 | Mibi-ChrMibi02 | 10892665 | 10893981 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi02g1099 | 1 | 429 | C3H Transcription Factor Family | AT3G58030 | 53.524 | 1.01e-136 | 397 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi02g1099 | 02 | 10892665 | 10893981 | Mibi02g1099 | 02 | 10892665 | 10893981 | ECH |