Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1095 ATGGCTAAGCCTCAACTACTGTTAGCAGTCACCATCTTCATCACTATCCTCTGCCATATCAAAGTCCACTGCTTTTCTTTCAGTTTCCCCATCTTGAAAACAGAAGATCAAAATCGCTTTATACTGAGCGATTTTTCTCGCATATACCAAGATGCCATTCAAGTGACCCCAGATGCTTACGGTGAAGATTTGAGGAACAGGTCCGGGAGGGCCTTTTACAATAAGGCATACAGAGTTTGGAGCAAGAAGAAGAAGCAAACGGCGTCGTTTAATACCAGCTTCATCCTCAATATCAGCCCCAACACTCCTTCAAACACAGGTGCAGGCGAAGGCTTGGCCTTCATACTAGCTTCTGACACAAACCTCCCTCCTAATAGCCATGGAAGATGGCTTGGCATTGTGAATTCATCCACAAATGGCACTTCTGGTGCATCAATATTGGCTGTGGAGTTTGATTCCAGGAACAACTCCCCAGATGAAAGCCCAAATGGTCATGTGGGTGTGGACGTGAACAGTATTTACTCCATCAAGCAGGTTCCTTTACTCCCCCTGGGGATCAATATTTCATCTGGCACCAATGTGTCAGTGAGAATTCAGTACAATAACGATGTGATTTCTGTGTTTGGTTACATGATGAGTGATGGAACCAGCGAACAAGACATGAAACTGTTGTTGAAATCCCCACCTCTCAATCTCACATCATACCTCCCTGAAAAGGTATTTGTGGGGTTCTCTGCATCCACAAGCGATTTCAGTGAGCTCAACTGCATCAGATCGTGGGAATTTAATGGTGAAGATATTGGAGAAGGAAATCAAGAGCTACTTTGGGTTTGGATAACAGTTCCGATGGTAGCCATGGTTGTGGCCAGTGGGGTGTTGTTTTTCTTGATATGGCGGTGGAGAAGAAAGAGGGAGATAGCAGAGGATGCGTATCCGAGGATAGAAGACCAGATAAACTGTTCCTCAATGGCTCCGAAGAAATTCCGGCTCAGGGAAATCAAAAGGGCCACCAACAATTTCAACGACCAGAACAACAAGCTTGGAGAAGGAGGATTTGGTAAAGTGTACAGAGGAATCGTACAGGGAAACAGAGAGATTGCTGTGAAAAGAGTGTCCAAGGATTCACGTCAGGGGAAGCAAGAATTCATAGCAGAAGTCACCACAATAGGCAGCCTTCACCACAAGAATCTGGTCAAACTCATAGGATGGTGTTACGAGAGGAACGAACTCCTCCTAGTCTACGAGTTCATGCCCAATGGAAGCCTAGACAAGTACTTATTCGAGAGCTCAGAGGGATCACCATATCAAAACCTTCATTGGGAAACAAGATACAGAGTCATACAGGGTGTAGCAGAGGCCCTTGACTATCTCCACAATGGGTGTGACAAGAAGGTGATTCACAGGGACATCAAGGCAAGCAATATCATGTTGGATTCAGAGTTCAATGCGAAGCTGGGAGACTTTGGACTGGCTCGCACAATACAGAAGAGAAACGAGACTCATCATTCAACAAAAGGGATTGCAGGAACACCTGGTTATATGGCTCCTGAGACGTTTCTTACAGGGAGGGCAACAGTGGAAACAGATGTGTATGCTTTTGGGGTTCTGATAATGGAAGTGGTGTGTGGGAAGAGGCCGGGGAATGTGTCTGTTCAGAATGACTACAAGAACAGCATGGTGTATTGGCTGTGGGAGATGTATGGGAATGGAAGGAGTTTAGAGGGGGTGGATAAGAGAATAAAGAAGGAGATTGAGGAAGATGATGAGAAGGAAGTGGAGAGAGTGATAGTGTTAGGATTGGCATGTTGTCATCCGAATCCTCATAAGAGGCCGTCAATGAAGACTGTGTTGCAGGTTCTGACAGGCGAGGTGGCTCCGCCAGATGTGCCAAGGGAACGGCCGGCTTTTGTGTGGCCGGCCGCTCCACCTTCATTCAACATCGATGATAACTCCACTCATTCAGCTCAACTCACTTCTCCTTTCACTGATCTCACTGGAAGATGA 2004 0.4621 MAKPQLLLAVTIFITILCHIKVHCFSFSFPILKTEDQNRFILSDFSRIYQDAIQVTPDAYGEDLRNRSGRAFYNKAYRVWSKKKKQTASFNTSFILNISPNTPSNTGAGEGLAFILASDTNLPPNSHGRWLGIVNSSTNGTSGASILAVEFDSRNNSPDESPNGHVGVDVNSIYSIKQVPLLPLGINISSGTNVSVRIQYNNDVISVFGYMMSDGTSEQDMKLLLKSPPLNLTSYLPEKVFVGFSASTSDFSELNCIRSWEFNGEDIGEGNQELLWVWITVPMVAMVVASGVLFFLIWRWRRKREIAEDAYPRIEDQINCSSMAPKKFRLREIKRATNNFNDQNNKLGEGGFGKVYRGIVQGNREIAVKRVSKDSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYERNELLLVYEFMPNGSLDKYLFESSEGSPYQNLHWETRYRVIQGVAEALDYLHNGCDKKVIHRDIKASNIMLDSEFNAKLGDFGLARTIQKRNETHHSTKGIAGTPGYMAPETFLTGRATVETDVYAFGVLIMEVVCGKRPGNVSVQNDYKNSMVYWLWEMYGNGRSLEGVDKRIKKEIEEDDEKEVERVIVLGLACCHPNPHKRPSMKTVLQVLTGEVAPPDVPRERPAFVWPAAPPSFNIDDNSTHSAQLTSPFTDLTGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1095 667 FunFam probable L-type lectin-domain containing receptor kinase S.5 417 626 - -
Mibi02g1095 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 263 IPR013320 -
Mibi02g1095 667 MobiDBLite consensus disorder prediction 647 667 - -
Mibi02g1095 667 CDD STKc_IRAK 347 622 - -
Mibi02g1095 667 SMART serkin_6 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1095 667 Pfam Legume lectin domain 26 266 IPR001220 GO:0030246
Mibi02g1095 667 ProSiteProfiles Protein kinase domain profile. 341 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1095 667 Gene3D - 23 272 - -
Mibi02g1095 667 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mibi02g1095 667 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Mibi02g1095 667 SUPERFAMILY Protein kinase-like (PK-like) 321 620 IPR011009 -
Mibi02g1095 667 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Mibi02g1095 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mibi02g1095 667 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Mibi02g1095 667 PANTHER - 57 627 - -
Mibi02g1095 667 Pfam Protein tyrosine and serine/threonine kinase 344 619 IPR001245 GO:0004672|GO:0006468
Mibi02g1095 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 24 271 - -
Mibi02g1095 667 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Mibi02g1095 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 325 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1095 Mibi-ChrMibi02 10835250 10837253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1095 22 649 Receptor kinase-like Gene Family AT5G55830 35.015 6.45e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi02g1095 PK_Tyr_Ser-Thr 3e-52 CL0016