Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1089 ATGTTCTCGTGGCTGGCAAGGATGGTTTCTACGTGTTTGAGACCATTAAAGCGGTATGCCCGTATGAAGAGGGATGATTTCGACGATTCTTCCTCGTCTGAAGACACCCTCCTTTGGTACAAGGAGCTTGAGAAGCACTCGTGTGGTGAATTCTCGTTTGCTGTAGTTCAAGCCAATGAAGTAATTGAGGATCAAAGCCAGGTTGTCACAGGCCCAGACGCCGTGTTTGTTGGAATATACGACGGCCATGGCGGTCCTGAAGCGTCCCGGTTCGTCTGTGACAACCTTTTCCAGCATCTAATGAGGATTGCTCAAGAAAATGGTACCTTATCTGAAGATACGCTCAGGGATGCTGTTTCTGCTACTGAAGATGGATTTCTTAATCTTGTTCAAAGAACAATTGGTATAAAGCCACTAATGGCAGCAACAGGTTCCTGTTGTTTGGTGGGTATTATTTGGAAGGGGACATTATATGTTGCAAATCTTGGAGATTCTCGTGCTGTAATTGGCTCTGTGCATGGGTCTAACAAGATCGTCGCTGAGCAGCTGACCAGAGAGCACAATGCAAGCAGAGAGGAAATTAGACGAGAACTCAGGACTTTGCATCCAGAAGATGCACAAATTGTAGTTATGAAGCATGGAACATGGCGTGTTAAAGGCATCATTCAGGTATCCAGATCTATAGGTGATGCATATTTGAAGAGACCAGAGTTCGCTCTTGATTCTTCCTTCCCACGGTTCCATCTGCCAGATCCTATCCGTGGACCTGTGCTTTCAGCAGAACCATCTGTGTGTTCCAGAGTTATACAGCCGAATGATAAATTTCTTATATTTGCGTCTGATGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATTGTTTATAACAACCCAAGAAATGGGATTGCAAGAAGACTTGCGAGAGCTGCCCTGAATGAGGCGGCTAGGAAGAGGGAAATGAGATGGAAAGACATGAAGAAAGTTGGGAAGGGGATCAGAAGGTTTTTTCATGATGACATCTCTGTTGTTGTGATCTTCATAGATCATGAGTTGCAGGGAAAGAAGATGACCGTACCAGAGCTATCCATTAGAGGTTTCACCGACAAGGTTGGACCATCAAATCTTAAAATTGTCATGAACTGA 1149 0.4482 MFSWLARMVSTCLRPLKRYARMKRDDFDDSSSSEDTLLWYKELEKHSCGEFSFAVVQANEVIEDQSQVVTGPDAVFVGIYDGHGGPEASRFVCDNLFQHLMRIAQENGTLSEDTLRDAVSATEDGFLNLVQRTIGIKPLMAATGSCCLVGIIWKGTLYVANLGDSRAVIGSVHGSNKIVAEQLTREHNASREEIRRELRTLHPEDAQIVVMKHGTWRVKGIIQVSRSIGDAYLKRPEFALDSSFPRFHLPDPIRGPVLSAEPSVCSRVIQPNDKFLIFASDGLWEHMTNQEAAEIVYNNPRNGIARRLARAALNEAARKREMRWKDMKKVGKGIRRFFHDDISVVVIFIDHELQGKKMTVPELSIRGFTDKVGPSNLKIVMN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1089 382 Pfam Protein phosphatase 2C 73 318 IPR001932 -
Mibi02g1089 382 Gene3D - 22 359 IPR036457 -
Mibi02g1089 382 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Mibi02g1089 382 FunFam Probable protein phosphatase 2C 42 41 357 - -
Mibi02g1089 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Mibi02g1089 382 SMART PP2C_4 44 347 IPR001932 -
Mibi02g1089 382 Coils Coil 180 200 - -
Mibi02g1089 382 SUPERFAMILY PP2C-like 54 350 IPR036457 -
Mibi02g1089 382 CDD PP2Cc 51 349 IPR001932 -
Mibi02g1089 382 PANTHER PROTEIN PHOSPHATASE 30 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1089 Mibi-ChrMibi02 10792302 10795253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1089 1 382 PP2C-type Phosphatase Gene Family AT5G06750 66.667 0.0 530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1089 02 10792302 10795253 Mibi06g1964 06 40195310 40197897 CCT
Mibi02g1089 02 10792302 10795253 Mibi02g1089 02 10792302 10795253 ECH