Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1078 ATGAACCAAAACACGGCTGATTTCTCAGTGCGAGTTCGAGTTCAACAGCAGAGTCACGGACTAAACGGGAATTCTAATTCTGAGTTTGGTAATAATAGTGATTGTGAGTTCATGGATATGAATCATGCTTGGAATATGGGAAGTTGCAGCCAAACACTAGCCATCGCCGGAGAAGGAGGAGGCCACCACCAACAACAACCACCACCAAAATCCTCTGCCACCATCATGAGCCGTTTTGAATCTCCAGCTTCTGCTTTTTATGCAACAGAACGATGCATGGGATTTCAGGCTCAGCAATATGATTCCCAACTTGGTAATCCTTCTTTGACCTCTCAGTTCTCCAAGATGAATGACTTGGATTTCCCTCTTTATCAGTCTGACCCCACCTTCGAATTTTCCAATACCCTGCAAGCAATGGTGAAATCTCCATCGAGAAGTACTAGTAACCAATACAATTGTAGATCCCCTGAAAAGTGCAATAAGTTTTCTTATGGGAATTTGCTCACCACCAACAAGTTTCTTCCTTTTCAACAAAATAGCTTGTTTAGTAACGACGCTGCCTCAGTTAAGAGAAACTCACCTTATATGGGAAATCAAGATCACACGATGAGTTTCTTTTCTCCACCGCTTGCGTCAGAAGGGAGTGTGGCAACTGTTTCTGGCAACCAGGGTTCCAATGGGACACAAGTCTCATCAAGCAAAACACGAATTAGGTGGAACCAGGATCTTCATGACAAGTTTGTTGAGTGTGTGAATCGCCTAGGAGGTGCTGAAAAGGCAACACCAAAAGCTATATTAAAACTGATGAACTCTGATGGATTGACCATCTTCCATGTGAAGAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGATTCATCTCAGGGAAAGCCTGATAAAAGACCCAGTGTAGAAGATGTGCATAATCTTGACCCCAAAACTGGATTGCAGTTAAGAGAGGCACTTCAGATGCAGTTAGATGTTCAAAGGCGCCTTCATGAACAGCTAGAGATTCAGAGAAAGTTGCAGTTGAGGATTGAGGAACAGGGGAGACAGCTGAAGAATATGTTTGATCAGCAGCAAAAGATGAGTGACAGCATCATGAATACTCAGAATTTGAGCAACACGTCCAATGATAATAACGGCACATCAAATAATCATAAAGACGTTGAATTATCAACTTCTGAAGGGTCTGGGAATTCTTTCTTCCCTTCCAAGATAAGTTAG 1233 0.4234 MNQNTADFSVRVRVQQQSHGLNGNSNSEFGNNSDCEFMDMNHAWNMGSCSQTLAIAGEGGGHHQQQPPPKSSATIMSRFESPASAFYATERCMGFQAQQYDSQLGNPSLTSQFSKMNDLDFPLYQSDPTFEFSNTLQAMVKSPSRSTSNQYNCRSPEKCNKFSYGNLLTTNKFLPFQQNSLFSNDAASVKRNSPYMGNQDHTMSFFSPPLASEGSVATVSGNQGSNGTQVSSSKTRIRWNQDLHDKFVECVNRLGGAEKATPKAILKLMNSDGLTIFHVKSHLQKYRIAKYMPDSSQGKPDKRPSVEDVHNLDPKTGLQLREALQMQLDVQRRLHEQLEIQRKLQLRIEEQGRQLKNMFDQQQKMSDSIMNTQNLSNTSNDNNGTSNNHKDVELSTSEGSGNSFFPSKIS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1078 410 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 234 289 IPR006447 GO:0003677
Mibi02g1078 410 MobiDBLite consensus disorder prediction 291 313 - -
Mibi02g1078 410 Pfam Myb-like DNA-binding domain 238 287 IPR001005 -
Mibi02g1078 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 231 291 IPR017930 -
Mibi02g1078 410 Coils Coil 321 341 - -
Mibi02g1078 410 MobiDBLite consensus disorder prediction 216 235 - -
Mibi02g1078 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 225 396 IPR044848 GO:0003700
Mibi02g1078 410 MobiDBLite consensus disorder prediction 296 310 - -
Mibi02g1078 410 Pfam MYB-CC type transfactor, LHEQLE motif 319 365 IPR025756 -
Mibi02g1078 410 FunFam Myb family transcription factor 233 291 - -
Mibi02g1078 410 SUPERFAMILY Homeodomain-like 232 288 IPR009057 -
Mibi02g1078 410 Gene3D - 233 292 - -
Mibi02g1078 410 MobiDBLite consensus disorder prediction 369 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1078 Mibi-ChrMibi02 10647269 10649068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1078 232 367 G2-like Transcription Factor Family AT3G04450 56.338 2.50e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi02g1078 Myb_DNA-binding 7.2e-06 CL0123