Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1075 ATGGGTTCATCCTCTGCCCACTCCCTTCAAGGCTTCAGCTTTGAGGATGACGTCACTGCCGGAGCTCCGGCCAAATCCTCCGCCGGCTCATCGGGGACCAAGAAGGTAAGGGGTGGTAATGGTACTGTTCAAGGAGCTCAGCCTCCGAGGTGTCAGGTTGAGGGGTGTAAGGTGGATCTGAGTGACGCCAAGCCTTACTATTCCAGGCATAAAGTCTGTGCCTTTCACTCTAAATCCTCTCAAGTCTTTCTTTCTGGCCTTCCACAGAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTACTGAATTTGATAAAGAAAAACGGAGCTGCCGCAGGCGACTTGCTGGCCATAATGAACGTCGCCGAAAGCCCCAGCCTAGCTCCTTGTTGATCTCTCCCTATGCCAGATTTTCTTCAGCTGTATTCGATAACCGGGGCAGAGTTGGTGGTTTTCTGATGGAATTTGCTGCAGACCATAAGCCAACTCAGAGGAATGTGTTGCCAGCACCAACATCAATGGAGCAGGTTTCAGGCAATCAAAGTTCAACACCTCCATGGCAACACAACTTGCAGACTCCTGAATTTCTCTTGCGAGGTTGGATGGGCAGGATAAACAGCTTTGGTCCCAGAAATCCTCCCGGGGAATGCTTCGCCGGAACTGCAGACACTAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGCCTCAGAAACACACCACCGGCTCTTGGAGTGAACAACTTCTGTTTCGGAGGGACATCCATCACACAACTTGCTGCATCCTCTCATGGTCCTCCCATTCCCATCCATCACCTCTCCAATGCCTCGGGGCCTTTCAAAGGCATTGAGCCTGATAATTGTTTGCGTGATGAGGTTTTTCCTCATCTTGGTGCGGATCAGATTTCTCTGTTTGGTAGCGAACTTCCTGGTGAGCTTGCAGCGCCACAATCCAACCGAAGACAATATGTTGATCAACATTCCCAAGCCTATGAGTCTCCTCAGCTGATGCACTGGTCACTTTGA 1029 0.5044 MGSSSAHSLQGFSFEDDVTAGAPAKSSAGSSGTKKVRGGNGTVQGAQPPRCQVEGCKVDLSDAKPYYSRHKVCAFHSKSSQVFLSGLPQRFCQQCSRFHQLTEFDKEKRSCRRRLAGHNERRRKPQPSSLLISPYARFSSAVFDNRGRVGGFLMEFAADHKPTQRNVLPAPTSMEQVSGNQSSTPPWQHNLQTPEFLLRGWMGRINSFGPRNPPGECFAGTADTSCALSLLSNQTWGLRNTPPALGVNNFCFGGTSITQLAASSHGPPIPIHHLSNASGPFKGIEPDNCLRDEVFPHLGADQISLFGSELPGELAAPQSNRRQYVDQHSQAYESPQLMHWSL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1075 342 Gene3D - 41 112 IPR036893 GO:0003677|GO:0005634
Mibi02g1075 342 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 23 278 IPR044817 GO:0003677
Mibi02g1075 342 SUPERFAMILY SBT domain 49 130 IPR036893 GO:0003677|GO:0005634
Mibi02g1075 342 Pfam SBP domain 51 124 IPR004333 GO:0003677
Mibi02g1075 342 ProSiteProfiles Zinc finger SBP-type profile. 48 125 IPR004333 GO:0003677
Mibi02g1075 342 MobiDBLite consensus disorder prediction 20 48 - -
Mibi02g1075 342 MobiDBLite consensus disorder prediction 24 40 - -
Mibi02g1075 342 FunFam Squamosa promoter-binding-like protein 14 42 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1075 Mibi-ChrMibi02 10620943 10623058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1075 31 342 SBP-box Gene Family AT3G57920 37.574 6.46e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi02g1075 SBP 1.8e-31 No_clan