Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g1060 | ATGTCTAATTTGTACGGCGATTACAATCAGAAGATTGATTATGTGTTCAAAGTGGTCTTGATCGGGGATTCTGCCGTGGGCAAAACTCAGCTGCTCGCACGTTTTGCACGCAATGAATTCAGTCTCGATTCCAAGGCAACTATCGGGGTTGAATTCCAGACCAAGACCCTCATCATTGACTCCAAAACGGTGAAGGCCCAGATTTGGGATACTGCAGGCCAAGAAAGGTACAGAGCAGTTACAAGTGCATACTACAGAGGTGCTGTTGGGGCAATGTTAGTATATGACATGACAAAGCGTCAATCATTTGACCACATGGCGAGATGGTTAGAGGAACTGAGAGGTCATGCGGATAAAAACATAGTGATTATGCTGATAGGCAATAAATGTGATCTGGGAGCTCTCAGAGCAGTGCCAACTGAAGATGCAGAAGAGTTTGCGCAAAGAGAAAACTTGTTCTTCATGGAGACATCAGCGCTAGAGTCTACCAACGTAGAAACTGCTTTCCTGACCATTTTGACTGAGATATACCGAATAATAAGGAAGAACACGCTAACTTCCAATGAAGAGGGAGAGTCGAGTGGTGCTGGGCTGTTGACGGGAACTAGGATTCTTGTTCCTAACCAAGTGCCTCAAACTGGAAACAAGAACTGTTGCTTTGGCTTAGATATGCCGGAATCAAGAGACAGGTTGTCAAGACCCCTTGACATTGCATCGTTATTCGCTCGTCGCCGAGCTAATATCTTGGGCATTCTTGATGACGAGTTCGAGTCAGCTTTATTCGGAACCACCACCACCACCACCACCACGGCGGATACCGGCGGAGCAATTAGGTTTAGTACTTTTGGAAGGGCCCGGTTCGGTTCGCCACGAACCGGAATTGGCCGTGGCCGTGCGCGTGGGCTTAATCTTTACAGGTCGCCGGCTACGGGCGTGGAGAACACTCCGCCGGGAATTCTACGGCGGGGCAGGGGACGGCGTTCTCGGACTCATCTACCTTCTTGGTATCCAAGAACCCCTCTGCGTGACATCACTGCCATTACCAGGGCAATGGAGAGGAGGAGAGGCCGTTTGGGAGATAACGAGGGCCATCAAATGGAGGGTCCAAGTAATTTAGATCAGATGCTTTCCGACCCTTCAATTGTAGAGTCTAGTTCCCAACTCGAGCATGAGACATCAGTGAACTCTTCAAGTGCAGATGTCGGTGTTAAACTCCAAACACCTGCTGCCGGTAAAGTTCCAAGGATTGTACTTGATATTGCGTGCAAGTCAGGAGAATCAGAACTTATAACGCCTCAGAAGCAACTTCTTAACTCTATTGACAAAGTTGAGAAAGTCGTGAAGGAGGAGTTGCAGAAATTCAGGAGGACGCCAATAGCAAAAAAGGCTGAGAGAGAAAAAAGAGTACGTACATTGATGTGTTCGGGAACTTTGATCTTACTTTTGGCCGAACGTCTTGGAGCAGGACAAGACCACTTTTTAATTGCGATGAAGGACAAGTTTGTTAATACTATTCCCCAGCTGAAGCCTGACCTCTGTCTGAACGATTGCCCTCCGTCTTCACCTTTTAACTCCAAACTAGATTGGCTTATTTTCTGGTTAAACAACCTAATCATGGCTGCCCTTACAGATAGCATTTTGTTCTACATTCTGAGCTGCTTAGTGTTGCTCATGTTCACTATGCTTTTCATTGTCAAGTCCTTTGGTGTTCAACTCGTGAATTCTGGGACCAAACATCGAAACCCACCTAGCCCACCGGCTCTACCCATCATTGGCCACCTTCACCTTGTTGGCTCAGTCATTCCCAAATCTTTCCAGAACCTGGCTCGTATTTATGGCCCTCTCATGCAGCTTCGTTTAGGTGCATCTACAACTTTAATTGTGTCCAATACCCAAGTAGCTCGAGAAGTTTTCAAAACCCATGAGCTCAACTTTTGTTATCGCCCGGAGTTTGGATCCTCTGATTATGACAACTACAGAGGCTCTTACTTCATCACAGCACCTTATGGCCCTTATTGGCGTTTCATGAAGAAACTTTGCGTCACCCAACTTCTCTCAACCTCCCAGCTTGGTCGCTTCACTCATGTCAGGGAGCAGGAGATTAAGAGCCTCTTGGATTCTCTTCTTCAGTGTTCTGCAGAAGCCAAAGGTTGCAATTTGAGCTTCAAGTTCACTGCTTTGACCAACAATATATTGTGTCGGATGGCTATGAGCACCACTTGCGATGCTGAACACATTCATAGGCTGGTTCGTGAGTGCTTGGAGTTAGGAGCTAAGCTAAGCTTAGGTGAAGTTTTGGGACCTCTTGCGAAGTTTGACTTATTTGGGTATGGGAAAAAGGTGGCAAAAGTTAAGTGCGAGCTTGATCAGATCCTGGAGATGATCATGAAAGAGCATGAGGAGAAGCTTAATCATAAGACGAGTTCTGAAGTAGAAGAGAGGGAAGACATGATGGACATATTATTACAGGTTTATAGAGATCCAAATGCTGAAGTAAAGCTCAAAAGAAACGACATTAAGGCTTTCTTTCTAGAAATATTCCTAGCAGGCACGGACACCACATCAGTGGCGTTGCAGTGGGTAATGGCAGAGATAATAAACCGGCCCAGAGTGTTTAATAAATTAAGGGAAGAGATGGATTCAATTGCAGGGACAAGAAGATTAGTAAAAGAAAGTGATGTACCAAATCTGCCTTATCTGCAAGCAGTTGTGAAGGAAGTTCTGAGACTCCACCCTTCAGCACCCTTTGCTCTCAGGCAATGTGCAGAAGATTGCAACATAAACGGCTACGATATCAAGGGACAAAGCAGGACCATGATCAACGTCTATGCTATAATGAGGGACCCAGAAGTGTGGGCCAGTCCCGAGGAGTTTATACCAGAGAGATTCTTGGATGGAAATGGAACCCAGAATATGATGCAAATGAAGGGTCAAGATCCAACATACGTTCCATTTGGGAGTGGAAGAAGGGGATGTCCAGGGGCATCTCTTGCTTTGACAGTAATACAAGCAACCATTGCTGCTTTGATTCAATGCTTTGATTTGAAAGTGAAAGGTGGCTCCAAGATTGATACTGCAGAAGGGTCAGGATTCTCTGTGGGTTTGGCCAAACCACTCGTTTGTTACCCTGTAGCTCGTCTTGATCTGTTGTCGGTTTAA | 3159 | 0.4596 | MSNLYGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDSKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGALRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRIIRKNTLTSNEEGESSGAGLLTGTRILVPNQVPQTGNKNCCFGLDMPESRDRLSRPLDIASLFARRRANILGILDDEFESALFGTTTTTTTTADTGGAIRFSTFGRARFGSPRTGIGRGRARGLNLYRSPATGVENTPPGILRRGRGRRSRTHLPSWYPRTPLRDITAITRAMERRRGRLGDNEGHQMEGPSNLDQMLSDPSIVESSSQLEHETSVNSSSADVGVKLQTPAAGKVPRIVLDIACKSGESELITPQKQLLNSIDKVEKVVKEELQKFRRTPIAKKAEREKRVRTLMCSGTLILLLAERLGAGQDHFLIAMKDKFVNTIPQLKPDLCLNDCPPSSPFNSKLDWLIFWLNNLIMAALTDSILFYILSCLVLLMFTMLFIVKSFGVQLVNSGTKHRNPPSPPALPIIGHLHLVGSVIPKSFQNLARIYGPLMQLRLGASTTLIVSNTQVAREVFKTHELNFCYRPEFGSSDYDNYRGSYFITAPYGPYWRFMKKLCVTQLLSTSQLGRFTHVREQEIKSLLDSLLQCSAEAKGCNLSFKFTALTNNILCRMAMSTTCDAEHIHRLVRECLELGAKLSLGEVLGPLAKFDLFGYGKKVAKVKCELDQILEMIMKEHEEKLNHKTSSEVEEREDMMDILLQVYRDPNAEVKLKRNDIKAFFLEIFLAGTDTTSVALQWVMAEIINRPRVFNKLREEMDSIAGTRRLVKESDVPNLPYLQAVVKEVLRLHPSAPFALRQCAEDCNINGYDIKGQSRTMINVYAIMRDPEVWASPEEFIPERFLDGNGTQNMMQMKGQDPTYVPFGSGRRGCPGASLALTVIQATIAALIQCFDLKVKGGSKIDTAEGSGFSVGLAKPLVCYPVARLDLLSV | 1052 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1060 | 1052 | MobiDBLite | consensus disorder prediction | 354 | 395 | - | - | |
| Mibi02g1060 | 1052 | SMART | rab_sub_5 | 16 | 179 | - | - | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 992 | 1015 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 727 | 745 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 633 | 654 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 941 | 965 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 982 | 992 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 858 | 884 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 901 | 919 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 609 | 628 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | E-class P450 group I signature | 838 | 855 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | Gene3D | Cytochrome P450 | 571 | 1037 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | Gene3D | - | 8 | 219 | IPR027417 | - | |
| Mibi02g1060 | 1052 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 558 | 1033 | - | - | |
| Mibi02g1060 | 1052 | Pfam | Cytochrome P450 | 582 | 1033 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | SMART | arf_sub_2 | 1 | 181 | - | - | |
| Mibi02g1060 | 1052 | CDD | Rab11_like | 13 | 177 | - | - | |
| Mibi02g1060 | 1052 | ProSiteProfiles | small GTPase Rab1 family profile. | 11 | 219 | - | - | |
| Mibi02g1060 | 1052 | SMART | ran_sub_2 | 21 | 231 | - | - | |
| Mibi02g1060 | 1052 | MobiDBLite | consensus disorder prediction | 367 | 395 | - | - | |
| Mibi02g1060 | 1052 | ProSiteProfiles | small GTPase Ras family profile. | 10 | 249 | IPR001806 | GO:0003924|GO:0005525 | |
| Mibi02g1060 | 1052 | SMART | ras_sub_4 | 13 | 179 | - | - | |
| Mibi02g1060 | 1052 | ProSiteProfiles | small GTPase Rho family profile. | 9 | 180 | - | - | |
| Mibi02g1060 | 1052 | FunFam | ras-related protein RABA5a | 8 | 219 | - | - | |
| Mibi02g1060 | 1052 | SUPERFAMILY | Cytochrome P450 | 578 | 1046 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | Pfam | Ras family | 17 | 177 | IPR001806 | GO:0003924|GO:0005525 | |
| Mibi02g1060 | 1052 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 985 | 994 | IPR017972 | GO:0005506|GO:0016705 | |
| Mibi02g1060 | 1052 | SMART | rho_sub_3 | 18 | 175 | IPR001806 | GO:0003924|GO:0005525 | |
| Mibi02g1060 | 1052 | FunFam | Cytochrome P450 family protein | 573 | 1041 | - | - | |
| Mibi02g1060 | 1052 | TIGRFAM | small_GTP: small GTP-binding protein domain | 15 | 172 | IPR005225 | GO:0005525 | |
| Mibi02g1060 | 1052 | MobiDBLite | consensus disorder prediction | 307 | 335 | - | - | |
| Mibi02g1060 | 1052 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 11 | 182 | IPR027417 | - | |
| Mibi02g1060 | 1052 | PRINTS | P450 superfamily signature | 983 | 992 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | P450 superfamily signature | 849 | 866 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | P450 superfamily signature | 992 | 1003 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Mibi02g1060 | 1052 | PRINTS | P450 superfamily signature | 902 | 913 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi02g1060 | Mibi-ChrMibi02 | 10481712 | 10490792 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1060 | 561 | 1048 | Cytochrome P450 | AT2G42250 | 53.427 | 0.0 | 546 |