Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1059 ATGGATTCCAATTCATTTCTAAATCATCAACACCAACGTCACCCCAATTCTGGGTTGCTTCGCTTTCGCTCTGCCCCTACTTCGGTTCTTACCGATTTCACTCAATCCCTTGCTTCTGATCTCACTAAGGGCAATAATCCCTGGGAGACTCCTGAATCCCATAAATTAGTCTCTAGATTTGTAAATACCGACGAACTGGATTCGCCTGGTTTCCCTGAATTCGAAGCCAAGGCCCCTAAACCACCGACTGAACCTATGAATTTGTGTAATAATAGTGGTTTACCCCCTCACTACCCTAGACAAAATTCCACTTCAAGTTCTGCCATGGATACTTCCTATGGGCTTGTGGAATCGTTGGGAATGGATCCTCAAACGCAGACGAAGACCTTCACTACGAATCTTCTCAGGCAAAGTAGTTCCCCTGCTGGCCTTTTCTCCAACACTTCCTTTCCAAATGGGTATTCCACCGTTAAGGGCGTTGCAAACTATGGTGGTGGGGCGAATGGCAGTAACGTTGGTGGGAGTCCATCCATGAGTAGATTGAAGAACCAGCTTGGCTTCTTATCAAGAAGTAATTCTTCCTTGGGAATGTTGTCGCAGATATCTGAGATAGAGGGTGAGAGCATTGAAGCAACCAACCCTGACAACGGGTGCTTGGGATCTGTGAATGGTTATGGCCCTGGCTTTCCATACAGCTCCTGGAATGACGCGTCCCATCTCTCAGAAAGTCTCGGTGGCTTGAAAAGAGAGCCAAGTAACAGTGAACATTTATTTTCTAATGCTCAGAATGGACCGCTGGGGAATCGGGTCCACATATTATCTCATCACTTGAGTTTGCCAAAACCTTCGGCAGATATGGGTGTCATGGAGAAGCTTCTTCAATTCCCAGATTCTGTTCCTTGTAAGATCAGAGCAAAGCGAGGATGTGCCACCCATCCTCGAAGCATTGCAGAAAGGGTAAGAAGAACTCGGATCAGTGAACGAATGAGAAAACTTCAAGAGCTCGTCCCAAACATGGACAAGCAAACAAACACATCAGACATGTTGGACTTAGCTGTTGAGTACATTAAAGATCTCCAAAAACAATTCAAGACTCTCAATGAAAAAAGGGCAAACTGCAAATGTATGAGCACGCAGAAAGCAGATACAAATCGTGTCATTTGA 1164 0.4536 MDSNSFLNHQHQRHPNSGLLRFRSAPTSVLTDFTQSLASDLTKGNNPWETPESHKLVSRFVNTDELDSPGFPEFEAKAPKPPTEPMNLCNNSGLPPHYPRQNSTSSSAMDTSYGLVESLGMDPQTQTKTFTTNLLRQSSSPAGLFSNTSFPNGYSTVKGVANYGGGANGSNVGGSPSMSRLKNQLGFLSRSNSSLGMLSQISEIEGESIEATNPDNGCLGSVNGYGPGFPYSSWNDASHLSESLGGLKREPSNSEHLFSNAQNGPLGNRVHILSHHLSLPKPSADMGVMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKDLQKQFKTLNEKRANCKCMSTQKADTNRVI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1059 387 Coils Coil 349 376 - -
Mibi02g1059 387 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 103 376 - -
Mibi02g1059 387 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 309 359 IPR011598 GO:0046983
Mibi02g1059 387 FunFam Transcription factor bHLH130 family 310 379 - -
Mibi02g1059 387 Pfam Helix-loop-helix DNA-binding domain 314 360 IPR011598 GO:0046983
Mibi02g1059 387 SMART finulus 315 365 IPR011598 GO:0046983
Mibi02g1059 387 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 312 375 IPR036638 GO:0046983
Mibi02g1059 387 CDD bHLH_AtbHLH_like 314 366 IPR045239 -
Mibi02g1059 387 Gene3D - 310 384 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1059 Mibi-ChrMibi02 10478643 10480651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1059 1 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 50.000 1.17e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g1059 HLH 6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1059 02 10478643 10480651 Mibi02g1059 02 10478643 10480651 ECH