Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1058 ATGAAATCCCATCTCTATCTTCCTCTCCACATTACTTCCATCCTCTTCCTCTTCATCTTCTTCTCTTCTCCCACCTCCTCATTGAACTCCGATGGGCTCTCTCTCCTGGCCCTCAAAGCCGCCATTGAATCCGACCCTTCCGGAGCCCTCAACTCGTGGTCCGACTCAGACTCCACCCCATGTCACTGGTCTGGTGTAGCCTGTACCCATAACCGAGTCACCCAACTCGTCCTTCCCAACAAAGGCCTCACCGGTTACATCCCCTCCGAACTCGGCCTTCTCAACTCACTCAAACAACTCAGCCTTCCGTACAACAACTTCTCCAACTCCATTCCCTCCCGTCTCTTCAATGCCACCTCCCTCATCCTTCTAGACCTCTCTCATAATCTCCTCTCTGGTCCAATCCCAAACGAAATCAGCTCTCTCAGATTACTCACACATTTGGATTTATCCTCCAATTCTCTTAACGGTTCTCTCCCTGAAGCTCTCTCTGGGCTAACTAACCTTGTTGGGAACTTGAATCTCTCTTACAATCACTTCACTGGTGGGATCCCTGAATCTTTAGGGAATCTCCCTGTGGTGGTTAGTTTAGATCTACAGAACAATAATCTCACTGGTGAGATCCCTCAATCAGGTTCTTTGCTCAACCAGGGGCCCACAGCTTTCTCTGGTAATCCTGGGCTCTGTGGGTTTCCTTTGCAGAATTCATGCCCTGAAGCTCAGAATCCTGATAACTACCCAACCACCCAAAACCCTGAAAACCCTAAAACCGTTAATCCTGGCTTCCCATCGGGATTTCAAGAGGCGAAGGTGAAAAATCGAGGCCGTTCCGTCATTGTATCTGTCATTTTCGGCGTGTCATTGGTGGCAGTGGCAGTTTTAGTGTCGGTGTGGGTTTTGCGACGACGTCGTACGGTTGATTTGGGGAAGTTAGGGAAGCAGAGATTGGAGAGTGAGGGAGGAGGAGGTGAAGGGCAGAAGGGTAAATTCGTGATCGTTGATGAAGGGTTTAATCTGGAATTGGAGGATTTATTAAGGGCATCTGCGTATGTTGTTGGGAAGAGTAAGAGTGGGATTGTGTATAAGGTCGTGGCTATGGCGAAAAGTTCCGGCACGGCGGCGACTGTGGTGGCCGTCCGGCGGCTGAGTGAGGGTGATGCCACGTGGAAGCTCAAGGAGTTTGAGGCTGAGGTGGAGACCATTGGAAGGGTCAACCACCCTAATATTGTTCGCTTTAGAGCGTATTACTATGCAAGTGATGAGAAGTTGATTATCACTGATTTCATCCGCAATGGAAGCTTGCACACTGCACTTCATGGTGGACCTTCGAATCCCTTGCCGCCATTGACATGGGCAGCGAGGTTAAATATTGCTCAAGGAGCTGCAAGGGGGTTAATGTACATACACGAGTTCAATGGTCGAAAATACGTGCATGGCAACTTTAAATCAACAAAAATCTTGCTAGACGATGAACTCCATCCTTTCATATCCGGTTTTGGGCTCACTCGTCTCATGTCAAGTAGCTTAAAGTCAACCGCAATGGCACCAAAACGACAGAATTCAAAGCAGTCTATTGCAACCTCAGCAATGGCAGCTTCCCTAAACAGCTACTTAGCACCAGAAGTGCGCATGAGTGGAGGCAAATATACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTGCTGTTAGAACTATTAACAGGACGGAGGCCAGATTCAGGAACAGATAATGAGGGTGAGGTACTTGAGAGTTTTGTGAGGCAGGCATTCAGGGAAGAGAAGCCATTGTGCGAGATCATAGACCCGGCACTTATTTCCGAAGTGTATGCTAAAAAGCAAGTAGTTGCAGCATTTCATCTTGCACTAAATTGCACAGAACATGACGCCGAGCTGAGACCAAGAATGAGAACCGTGTCAGAGAGCCTTGATCGGATCAAGGCACCGTGA 1947 0.4833 MKSHLYLPLHITSILFLFIFFSSPTSSLNSDGLSLLALKAAIESDPSGALNSWSDSDSTPCHWSGVACTHNRVTQLVLPNKGLTGYIPSELGLLNSLKQLSLPYNNFSNSIPSRLFNATSLILLDLSHNLLSGPIPNEISSLRLLTHLDLSSNSLNGSLPEALSGLTNLVGNLNLSYNHFTGGIPESLGNLPVVVSLDLQNNNLTGEIPQSGSLLNQGPTAFSGNPGLCGFPLQNSCPEAQNPDNYPTTQNPENPKTVNPGFPSGFQEAKVKNRGRSVIVSVIFGVSLVAVAVLVSVWVLRRRRTVDLGKLGKQRLESEGGGGEGQKGKFVIVDEGFNLELEDLLRASAYVVGKSKSGIVYKVVAMAKSSGTAATVVAVRRLSEGDATWKLKEFEAEVETIGRVNHPNIVRFRAYYYASDEKLIITDFIRNGSLHTALHGGPSNPLPPLTWAARLNIAQGAARGLMYIHEFNGRKYVHGNFKSTKILLDDELHPFISGFGLTRLMSSSLKSTAMAPKRQNSKQSIATSAMAASLNSYLAPEVRMSGGKYTQKCDVYSFGIVLLELLTGRRPDSGTDNEGEVLESFVRQAFREEKPLCEIIDPALISEVYAKKQVVAAFHLALNCTEHDAELRPRMRTVSESLDRIKAP 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1058 648 ProSiteProfiles Protein kinase domain profile. 346 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1058 648 Gene3D Ribonuclease Inhibitor 171 239 IPR032675 -
Mibi02g1058 648 MobiDBLite consensus disorder prediction 235 265 - -
Mibi02g1058 648 Gene3D Phosphorylase Kinase; domain 1 331 428 - -
Mibi02g1058 648 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Mibi02g1058 648 SUPERFAMILY L domain-like 30 234 - -
Mibi02g1058 648 MobiDBLite consensus disorder prediction 235 261 - -
Mibi02g1058 648 Gene3D Ribonuclease Inhibitor 27 170 IPR032675 -
Mibi02g1058 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 646 - -
Mibi02g1058 648 Pfam Protein tyrosine and serine/threonine kinase 352 596 IPR001245 GO:0004672|GO:0006468
Mibi02g1058 648 Gene3D Transferase(Phosphotransferase) domain 1 429 648 - -
Mibi02g1058 648 FunFam Leucine-rich repeat receptor-like protein kinase 146 239 - -
Mibi02g1058 648 SUPERFAMILY Protein kinase-like (PK-like) 351 642 IPR011009 -
Mibi02g1058 648 FunFam Leucine-rich repeat receptor-like kinase 33 145 - -
Mibi02g1058 648 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1058 Mibi-ChrMibi02 10465983 10468887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1058 28 647 Receptor kinase-like Gene Family AT3G57830 60.125 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi02g1058 PK_Tyr_Ser-Thr 4.3e-29 CL0016