Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1052 ATGGAGCAAACTGCACGAGGTTTCACTGGATTCTGTCTCACTGCTTCTGAAAGCGATCGTGCTGCACTTGAATCCGTTCAATTCAACGAGGAAATCGAACGAATCATAGCTCCAGCCGCGGAAAATCTCAGCTCCTTCACCGCACTTCTCGAATTACCACCCGCGCAAGCCAAGGAGATCCTCCACTCGCCTAACTGTGACGGAGCCGCCGCCGTGGTCCCCGCCTACGGCGAACTAGCCTTATGCCATATCAACGATCAGAAACCCCAAATATTTCACCCTCTCAGCGGCAATTTAACACCTCCTTCTGACACTGCTTTGATCGAACGTGCTGCTAAGTTTTCGGTGTTTGCCGAAGAGAACTCGTCGCCGGAGGAGCTCAACTTGACTCCTCTTGCTTCAAATTTAGACAGAGTGAAGCATGAACCACCGGAAATCGATTCAAATCCTAATCAAATCTCTGTTTTCGCTTCTAATCCTCAAATTGAGTACAAGAACGAGAAGGCCACAAAGAGAAAAGAACGAGAGAAGAAGGATAAAGAGACCTCGAAGAAGAGTAAAAGCGTCGCCGACGAAACATCCGGAGATGGAGATAAGCTTCCATACGTTCATGTTCGAGCTCGTCGAGGGCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCCAGGAGAGAGAAAATCAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCTGGCTGCAATAAGATTTCAGGAACAGCCTTAGTTCTGGATGAAATCATCAACCATGTTCAATCTCTTCAACGTCAAGTGGAGTTCTTGTCGATGAAACTAGCAGCAGTTAACCCAAAAATTGATTTCGACCTTGACAGCATACTGGCTACCGAGGGTGCATCTCGAGTGGACTGCAACTTTCCGGACATGGTTACACCTCCAGTGTGGCAGGAAGTTCCAGTCAATGGAAACAGGCAGCAATATCAACAACCGTGGCAATTTGATGCATTTAACCAACCAATTTGGGTGAGGGAGGAAGTGAATCGTAATATCATGACCCCAGACAACTCTCTCTTGAGTTATGACTCGCTGGCAAATTCAGCATCTATGCACTCAAATAATTTGAAGATGGAGCTGTGA 1116 0.4731 MEQTARGFTGFCLTASESDRAALESVQFNEEIERIIAPAAENLSSFTALLELPPAQAKEILHSPNCDGAAAVVPAYGELALCHINDQKPQIFHPLSGNLTPPSDTALIERAAKFSVFAEENSSPEELNLTPLASNLDRVKHEPPEIDSNPNQISVFASNPQIEYKNEKATKRKEREKKDKETSKKSKSVADETSGDGDKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPKIDFDLDSILATEGASRVDCNFPDMVTPPVWQEVPVNGNRQQYQQPWQFDAFNQPIWVREEVNRNIMTPDNSLLSYDSLANSASMHSNNLKMEL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1052 371 CDD bHLH_AtBPE_like 201 286 - -
Mibi02g1052 371 SMART finulus 217 267 IPR011598 GO:0046983
Mibi02g1052 371 Coils Coil 251 271 - -
Mibi02g1052 371 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 165 351 IPR024097 GO:0006355
Mibi02g1052 371 MobiDBLite consensus disorder prediction 140 200 - -
Mibi02g1052 371 Coils Coil 166 186 - -
Mibi02g1052 371 FunFam transcription factor bHLH48-like isoform X1 208 280 - -
Mibi02g1052 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 261 IPR011598 GO:0046983
Mibi02g1052 371 Gene3D - 208 280 IPR036638 GO:0046983
Mibi02g1052 371 MobiDBLite consensus disorder prediction 165 200 - -
Mibi02g1052 371 Pfam Helix-loop-helix DNA-binding domain 215 262 IPR011598 GO:0046983
Mibi02g1052 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 279 IPR036638 GO:0046983
Mibi02g1052 371 MobiDBLite consensus disorder prediction 147 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1052 Mibi-ChrMibi02 10402836 10407284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1052 22 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 48.533 1.63e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g1052 HLH 1.4e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1052 02 10402836 10407284 Mibi02g1052 02 10402836 10407284 ECH