Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1049 ATGGCGAAGAAGAAGAAGGCTAGGGTTTCTGAAGATGAAAGTCTTGGATCCGAACAAGAAGCGGAGATAAAGGATGAAAACCCAAGTTCGTCTACGGGAAAGAGCCTCTACGAGGTTCTTGGAGTGGAGAGGACGGCATCTCAACAGGAAATAAAGAAAGCATACTACAAGTTAGCATTGCGGCTCCATCCGGATAAAAACCCTGGTGATGAGGAAGCCAAGGAGAAATTTCAGCAATTGCAAAAAGTGATCTCTATTCTTGGTGATGAGGAGAAACGGGCTATTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCAGGGGAAGCTGCTCAGAATCTTCATGAGTATTTCAGAACTGTGTACAAGAAGGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAATTATAGGGGATCAGACTCAGAGAGAAATGACTTAATTGATCTATATAAAAAGTGCAAGGGTAATATGAACAGGCTCTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACATCGATTTAAGGATATTCTTGATGAGGTTATAGCTGCTGGCGAACTGAAGTCTACTAAAGCCTACCAGAAATGGGTAAAGAAAGTTGATGAAATGAAGCCACCAACCAGTCCTTTAAGGAGAGCAAAGTCAACTAAGCAGGCTGGAACGGATCTATATGCAATCATATCTCAACGCCGAAATGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCATTAATTTCTAAATATGGAGGGGGTGATGCAGCAGAGCCCAGTGAAGAAGAGTTTGAAGCCACCCAGAGAAAACTTGAAAGCCGAAGGTTGTCAAAAAAATCAAAACGCAAGTAA 858 0.4184 MAKKKKARVSEDESLGSEQEAEIKDENPSSSTGKSLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRAIYDQTGCVDDADLAGEAAQNLHEYFRTVYKKVTEADIEEFEANYRGSDSERNDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEVIAAGELKSTKAYQKWVKKVDEMKPPTSPLRRAKSTKQAGTDLYAIISQRRNERKGQFDSMFSSLISKYGGGDAAEPSEEEFEATQRKLESRRLSKKSKRK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1049 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 24 285 IPR042977 -
Mibi02g1049 285 Pfam DnaJ domain 36 97 IPR001623 -
Mibi02g1049 285 SMART dnaj_3 34 92 IPR001623 -
Mibi02g1049 285 SUPERFAMILY Chaperone J-domain 33 113 IPR036869 -
Mibi02g1049 285 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Mibi02g1049 285 MobiDBLite consensus disorder prediction 1 34 - -
Mibi02g1049 285 CDD DnaJ 37 89 IPR001623 -
Mibi02g1049 285 MobiDBLite consensus disorder prediction 1 27 - -
Mibi02g1049 285 PRINTS DnaJ domain signature 37 55 IPR001623 -
Mibi02g1049 285 PRINTS DnaJ domain signature 92 111 IPR001623 -
Mibi02g1049 285 PRINTS DnaJ domain signature 72 92 IPR001623 -
Mibi02g1049 285 PRINTS DnaJ domain signature 55 70 IPR001623 -
Mibi02g1049 285 MobiDBLite consensus disorder prediction 253 285 - -
Mibi02g1049 285 Gene3D DnaJ domain 19 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1049 Mibi-ChrMibi02 10367080 10370234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1049 29 97 C2H2 Transcription Factor Family AT1G74250 39.189 2.41e-08 53.1