Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1048 ATGGAGACCGAAAATGGTGATGCCAAGTCAAAGATGGAGGAGTATGAAGTAATAGAGCAAATTGGCAGAGGAACACTGGGCACCTCCTTCCTCGTTCTCCATAAGAATGAGAAAAAGAAGTATGTGCTGAAGAAGATTCGCTTGGCTAAGCAAATCGATAAGTCTAAACGTACAGCGCAACAAGAGATGAACCTGATTTCAAAACTAAACAACCCATATATCGTGGAGTACAAAGATGCTTGGATGGAAAAGGAGGACTGTATATGCATTATAACCGGCTATTGTGAAGGAGGTGACATGGCTGAAATGATAAAGAGAGCCCGGGGATCTTTTTTCTCTGAGGAGAAAATCTGCAAATGGCTGACTCAATTATTGCTTGCTGTGGACTATCTGCATTCTAACCGAGTACTCCATGGAGATCTTAAGTGTTCCAACATATTCCTTTCCAAAGGCGACATTCGACTTGGTGACTTTGGTCTTGCAAAACTGCTTAACACAGACCACCTTGCTTCATCGGGTGTGGGAACTCCAAACTACATGTGTCCTGAGCTCCTTGAAAATATGCCTTATGGCTATAAATCTGATATATGGTCGCTTGGTTGTTGCATGTTTGAAATTGCTGCACATCAAGCTGCATTTCGTGCTCCAGACAAAGCCGGGCTTATCAATAAGATAAATAGATCCTCCATTTCTCCACTGCCAATTGTTTATTCGCCAACGCTGAAACAAATTATCAAGACCATGCTGAGGAAGAATCCAGAACATAGACCAACAGCACTGGAATTGTTAAGGCATGCTCATTTACAACCATACGTTCTCCGCTGTCGGAATGCATCAGCTATCCTTCTTCCAATAAAATCTGTCGGCAGCCCAAATAGTAGCCCAAATAATAAGACAAAAAGATCTTATAGGTCTGGTGATGGGAAAGACCATGGGGATAGAGAAGTAGGGGGATTAACTAATCGATTGGAAAGGATTTATCCATTTGAGGCAAATGGTAATGTACATCCAAGCAGTGTTGCTAAGCGAACAGGGTCGTCTAGTGTCGAAGACAACCTTGAGACCAAGATGGTTGATCCCACCTGCTACATTGTAGAATCATGTTCTAGTATTAGTGGCTCAAAAGCCGGCTCAACAACATCTGAATCTACTGTTAGTAGTGTGTTCAAGGAAGTGGACTTTAAAATTAAACCCGCAAGTGAAACAGTTGATAACGAAGATACATCTAAGACAATTCCAGAAGATTCTCAGCATGAAGAACTAGGATTGAATGCTGAACATTTTCAAAAATCAGAAAGGGTTGACACGGATGCAGTGGCCACAAATGTGAAAGGTATGCTTTCCTATGATGGTTCCGCCGAAGCCAAGGGACAGAGGGAAAGTACTACCATACATGAGGACTCCAAGAAACCAATCATGTCCTGTGCAGGGAGCTGTGATGAAGATGGGTCCATCAAGGAAACGTTAAAACCACCTCCACCGTCACCGCCTATTCAGCCGGTTAGGGTTAGGGTCGAACAGGACACCGAATCTGAAAGCTGTTTAAAGAGAAGCCATGATACCATTGCATCTTTGGAAGGCCTTCACTTGGAATGTTTGTCTTCTGAGAGTATAGATGATAAGACTGCAGGTAAAGCTGGAGGTCAATCAAGAACACTTGATGACACCACTTGCTCCATGAATAAAGAAAATGAAACTGTTAGTGTCGCTGATCAGATTGGTGGTGATGAAATCAAGACTGTGCTGGAGAGACCATGCGAGCAAAGAGCTGATGCTCTGGAGTCTCTACTTGAGTTATGTGCTCGGTTACTTAAGCAGGACAAACTTGATGAGCTTGCTCGAGTGCTTGGACCATTTGGGCATGAAGCTGTCTCATCCAGAGAGACAGCAATATGGTTGACAAAGAGCCTCATATCCGCCCAGAAAAAATTGAACACAGAAAACTAA 1947 0.4314 METENGDAKSKMEEYEVIEQIGRGTLGTSFLVLHKNEKKKYVLKKIRLAKQIDKSKRTAQQEMNLISKLNNPYIVEYKDAWMEKEDCICIITGYCEGGDMAEMIKRARGSFFSEEKICKWLTQLLLAVDYLHSNRVLHGDLKCSNIFLSKGDIRLGDFGLAKLLNTDHLASSGVGTPNYMCPELLENMPYGYKSDIWSLGCCMFEIAAHQAAFRAPDKAGLINKINRSSISPLPIVYSPTLKQIIKTMLRKNPEHRPTALELLRHAHLQPYVLRCRNASAILLPIKSVGSPNSSPNNKTKRSYRSGDGKDHGDREVGGLTNRLERIYPFEANGNVHPSSVAKRTGSSSVEDNLETKMVDPTCYIVESCSSISGSKAGSTTSESTVSSVFKEVDFKIKPASETVDNEDTSKTIPEDSQHEELGLNAEHFQKSERVDTDAVATNVKGMLSYDGSAEAKGQRESTTIHEDSKKPIMSCAGSCDEDGSIKETLKPPPPSPPIQPVRVRVEQDTESESCLKRSHDTIASLEGLHLECLSSESIDDKTAGKAGGQSRTLDDTTCSMNKENETVSVADQIGGDEIKTVLERPCEQRADALESLLELCARLLKQDKLDELARVLGPFGHEAVSSRETAIWLTKSLISAQKKLNTEN 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1048 648 MobiDBLite consensus disorder prediction 302 316 - -
Mibi02g1048 648 MobiDBLite consensus disorder prediction 481 500 - -
Mibi02g1048 648 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Mibi02g1048 648 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1048 648 Gene3D Transferase(Phosphotransferase) domain 1 97 305 - -
Mibi02g1048 648 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1048 648 SUPERFAMILY Protein kinase-like (PK-like) 11 285 IPR011009 -
Mibi02g1048 648 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 12 539 - -
Mibi02g1048 648 MobiDBLite consensus disorder prediction 286 316 - -
Mibi02g1048 648 MobiDBLite consensus disorder prediction 286 301 - -
Mibi02g1048 648 Pfam Protein kinase domain 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1048 648 MobiDBLite consensus disorder prediction 451 473 - -
Mibi02g1048 648 CDD STKc_Nek 15 268 - -
Mibi02g1048 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1048 Mibi-ChrMibi02 10360216 10365130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1048 21 269 MAP Kinase Kinase Kinase AT1G53570 32.157 1.52e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mibi02g1048 Pkinase 5.9e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1048 02 10360216 10365130 Mibi06g1922 06 39724180 39729079 CCT
Mibi02g1048 02 10360216 10365130 Mibi02g1048 02 10360216 10365130 ECH