Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1031 ATGCAACAAAAATTGGAGCCTGCAAAGAGTTCTGAATCAGATATATGCAGCAACAAACTATATACGACATATTCTCAAGCTTGGTGGCATGACACAGGGCATGATGCCTTGTCTAAAGAGATGGCAGGGGAAGTCAAAATGAATTATTTTGTGCCTCAACATTTGGATGCTAGTTTTGGGAACCGGACCAGTAAATCACAAGCTATGACTTTTCTGGCTGAAGCGAAAGAAGCTACCAAAGAGAAAGGTGGAGAAAAGTATGAAGAACATCAACTGAAGCAATTTTCTGTCCGTACTGCGCCTTCAACAGCATGTGCATCCTATCCTTATCCAGATCCACATTATGGGGGAGCGATTCCTACTTATGGACCTCAGCCTTTGTTACACCCTCCTCCTAGTCTTGGAGTGCATTCTTCTAGAATGGTTTTACCTCTGCAAATGGAAGAAGAACCTGTGTACGTTAATGCCAAGCAGTACCATGGAATCTTGAGGCGTAGGCAATGCCGTGCCAAGGCCGAGCTTGAGAAGAAGGAGATAAAAGTGAGAAGGAAGCCTTATCTTCACGAGTCTCGGCATTTGCACGCCTTGAGAAGAGCAAGAGGGTGTGGAGGCCGTTTTCTGACAACAAAGAAGGCCGACGGTCCTGCTACAAACACAGCAACAAAAAACCGGGATATTGTTAGTACAGACCACAAAGGCATGATGTCTCTCAATTTGCCTGCCATTGCTGATTCAAATTCTGGCTCCCAAGAAATCTTGAATTCCCACCAATCAGACATGCACTCCACTTCTAATGGTCACAACAATTACTACTCGCACGTTCATGGATTTGAGCTGCCTGGTTATCAGCCTCTCTCCAGTGATAGAGGAAACCAAAGGGATTTCTCTGGGACTCCCAGGGCCCTGACCATCAAATAA 918 0.4532 MQQKLEPAKSSESDICSNKLYTTYSQAWWHDTGHDALSKEMAGEVKMNYFVPQHLDASFGNRTSKSQAMTFLAEAKEATKEKGGEKYEEHQLKQFSVRTAPSTACASYPYPDPHYGGAIPTYGPQPLLHPPPSLGVHSSRMVLPLQMEEEPVYVNAKQYHGILRRRQCRAKAELEKKEIKVRRKPYLHESRHLHALRRARGCGGRFLTTKKADGPATNTATKNRDIVSTDHKGMMSLNLPAIADSNSGSQEILNSHQSDMHSTSNGHNNYYSHVHGFELPGYQPLSSDRGNQRDFSGTPRALTIK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1031 305 Gene3D - 148 211 - -
Mibi02g1031 305 PRINTS CCAAT-binding transcription factor subunit B signature 151 173 IPR001289 GO:0003700|GO:0006355
Mibi02g1031 305 PRINTS CCAAT-binding transcription factor subunit B signature 183 206 IPR001289 GO:0003700|GO:0006355
Mibi02g1031 305 ProSiteProfiles NF-YA/HAP2 family profile. 148 209 IPR001289 GO:0003700|GO:0006355
Mibi02g1031 305 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 150 206 IPR001289 GO:0003700|GO:0006355
Mibi02g1031 305 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 75 265 IPR001289 GO:0003700|GO:0006355
Mibi02g1031 305 MobiDBLite consensus disorder prediction 282 305 - -
Mibi02g1031 305 ProSitePatterns NF-YA/HAP2 subunit signature. 153 173 IPR018362 GO:0003677|GO:0016602
Mibi02g1031 305 SMART cbf3 147 209 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1031 Mibi-ChrMibi02 10154662 10160696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1031 103 206 CCAAT-HAP2 Transcription Factor Family AT5G12840 63.462 8.94e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi02g1031 CBFB_NFYA 8.9e-25 No_clan