Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1027 ATGCTTTGGATTGATCTATCGAAAGGCATTAGTATATTCGTTATCACTGGCGTCGCAAATTTCCATCCCTTAACGAAATCCTCTCTCACTCCCTCTCGAGACCTCTCTGCAACTCGAGAGAGAGTGTGTGTGATGGAAATGGCACTCAATTCCCACAGAGTTTCCTTCTCCTTCTCCTCCATGGCGGCTACTTCTAGCCTTCGAAGGAATTCTTTTCCTCCCCAGTTTGCTAATCAACTGTTTGGCATTCCGTTTTCTCCCTCAACGGCCAACAAACTGCCTCTGCAATTTGTTTCCAGGAAATCTTCTTGTGGGCCCATCAAATGCTCCGTTTCTGAAGTTACAGAACCCAAGACTGAGAAGAAGAAACAGCTGGAGAGAAGAAGAGACATAAGAAACATAGCAATTGTGGCTCATGTTGATCATGGAAAAACAACTTTAGTTGATGCTATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATTTGTCCAGGAAAGAATAATGGATTCAAATGATTTGGAGCGTGAAAGAGGAATTACAATACTGAGTAAAAACACATCTGTCACCTATAAAGACAGCAAGATTAATATAATAGATACCCCAGGTCACTCTGACTTCGGAGGAGAAGTGGAGCGCATTCTAAATATGGTGGAAGGAATCCTTTTAGTGGTAGACTCTGTTGAAGGTCCAATGCCACAGACAAGATTTGTTTTAAAGAAGGCCCTAGAGTTTGGGCATGCAGTTGTTGTTGTTGTCAATAAAATTGATAGACCTTCTGCTCGGCCAGACTTTGTCATTAATTCTACTTTTGAACTGTTTCTTGAACTAAATGCGTCAGATGAACAGTGTGACTTCCAAACAATATATGCTAGTGGCATAAAGGGACAAGCAGGACTAACACCTGAAAATTTGGCAGAAGATCTTGGCCCATTGTTTGAAGCTATAATCAGATGCATCCCTGGACCACATATTGACAAAGACGGTGCACTGCAAATGCTGGCTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGACGCTTGCAAGCTGGAGTATTAGAAAAGGGCATGGATGTCAGGGTGTGTACTTCTGAAGATTCATGCAGATTTGGAAGAGTTAGTGAGCTTTTTGTGTATGACAAATTCAGCAGGGTCCCTGCAGAACGTGTGGAGGCTGGTGATATATGTGCTGTATGTGGAATTGCTGATATTCAGATTGGGGAAACAATTGCTGACAAGGTATCGGGGAAGCCACTGCCATCCATCAGGGTGGAAGAACCTACTGTGAAAATGTCTTTTTCCATAAACACTTCACCTTTTGTTGGGCGCGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTCTATCGTGAGCTAGAGCGAAATTTGGCCATGAAAGTTGAAGACGGTGAAACAGCAGACACCTTTATTGTCAGTGGTCGTGGTACTTTGCACATAACCATACTCATAGAGAATATGCGAAGAGAAGGATATGAATTCATGGTAGGTCCTCCCAAAGTAATCAACAAGAAAAAGGGCGACCGGCTGCTGGAACCATATGAGATTGCCACTGTGGAGGTACCAGAAGAACACATGGGAGCTGTTGTTGAACTTCTGGGCAAGAGACGAGGACAAATGTTCGATATGGAAGGAGTTGGATCGGAAGGAACTACCCTACTCAAATATAAGATTCCAACCCGTGGCCTTTTGGGATTGCGGAATTCTATCTTAACAGCTTCCCGTGGAACAGCAATTCTCAACACTATCTTTGATAGCTATGGGCCTTGGGCTGGGGACATCAGTACTCGGGATCAGGGCTCACTGGTTGCTTTTGAAGATGGAACAAGTACTTCTTATGCGCTTGCTAGTTCACAGGAGAGAGGACAGATGTTTATTGGTCCTGGAGTGGATGTTTACAAAGGTCAAATTGTTGGTATCCATCAGCGACCTGGGGATTTGTCCTTAAATGTTTGCAAGAAAAAGGCTGCTACAAATATTCGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGATTATAGTCTGGATGACTGCATCGAGTACATCCAAGAAGATGAACTAGTGGAGGTCACTCCTCAGAGCATCCGAATGTGCAAGAACCCTAAACTAGCAAAGAAAACAAGGTAG 2172 0.4305 MLWIDLSKGISIFVITGVANFHPLTKSSLTPSRDLSATRERVCVMEMALNSHRVSFSFSSMAATSSLRRNSFPPQFANQLFGIPFSPSTANKLPLQFVSRKSSCGPIKCSVSEVTEPKTEKKKQLERRRDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDSKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVINSTFELFLELNASDEQCDFQTIYASGIKGQAGLTPENLAEDLGPLFEAIIRCIPGPHIDKDGALQMLATNIEYDEHKGRIAIGRLQAGVLEKGMDVRVCTSEDSCRFGRVSELFVYDKFSRVPAERVEAGDICAVCGIADIQIGETIADKVSGKPLPSIRVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKKGDRLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTSTSYALASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLAKKTR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1027 723 CDD BipA_TypA_II 331 424 - -
Mibi02g1027 723 Pfam Elongation factor Tu GTP binding domain 130 321 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 PRINTS GTP-binding elongation factor signature 197 207 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 PRINTS GTP-binding elongation factor signature 133 146 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 PRINTS GTP-binding elongation factor signature 177 185 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 PRINTS GTP-binding elongation factor signature 249 258 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 FunFam GTP-binding protein TypA 432 537 - -
Mibi02g1027 723 CDD TypA_BipA 130 323 - -
Mibi02g1027 723 CDD BipA_III 431 509 - -
Mibi02g1027 723 CDD BipA_TypA_C 524 603 IPR035651 -
Mibi02g1027 723 SUPERFAMILY Translation proteins 278 424 IPR009000 -
Mibi02g1027 723 Gene3D - 515 608 - -
Mibi02g1027 723 FunFam GTP-binding protein TypA 609 695 - -
Mibi02g1027 723 TIGRFAM small_GTP: small GTP-binding protein domain 131 264 IPR005225 GO:0005525
Mibi02g1027 723 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 131 719 IPR006298 GO:0003924|GO:0005525
Mibi02g1027 723 FunFam GTP-binding protein TypA 325 425 - -
Mibi02g1027 723 FunFam GTP-binding protein TypA 128 324 - -
Mibi02g1027 723 FunFam GTP-binding protein TypA 515 608 - -
Mibi02g1027 723 SUPERFAMILY EF-G C-terminal domain-like 429 513 IPR035647 -
Mibi02g1027 723 Gene3D Elongation Factor G (Translational Gtpase), domain 3 432 715 - -
Mibi02g1027 723 Pfam Elongation factor Tu domain 2 345 414 IPR004161 GO:0005525
Mibi02g1027 723 Pfam Elongation factor G C-terminus 521 607 IPR000640 -
Mibi02g1027 723 SUPERFAMILY EF-G C-terminal domain-like 524 639 IPR035647 -
Mibi02g1027 723 Gene3D Translation factors 325 425 - -
Mibi02g1027 723 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 129 324 IPR000795 GO:0003924|GO:0005525
Mibi02g1027 723 Gene3D - 128 324 IPR027417 -
Mibi02g1027 723 Gene3D bipa protein 609 688 IPR042116 -
Mibi02g1027 723 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 170 185 IPR031157 -
Mibi02g1027 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 332 IPR027417 -
Mibi02g1027 723 SMART EFG_C_a 521 610 IPR000640 -
Mibi02g1027 723 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 603 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1027 Mibi-ChrMibi02 10129340 10136808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1027 129 258 Eukaryotic Initiation Factors Gene Family AT3G22980 43.939 4.78e-24 106