Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g1026 | ATGGGAAATTGTTGTGTAACTCCGTCTGGACCTCGTGAGACGAAGAAGAAAGGAAAGAAGAAGAAGGAAAATCCATTTGCCAGCGATGACTTTAACTACTCTGCCAACGGTGGAAGCAAGCTCGCCGTTTTGAAAGATCCGACGGGTCGCGAAATTGAGCGAAAATACGAGCTAGGTCGCGAGCTTGGTAGGGGTGAATTCGGAATTACATACCTGTGTACGGACAGAGAGACGGGTGAAGTTTTAGCTTGCAAATCGATATCGAAGAAGAAGCTAAGAACAAACATAGATATCGAGGACGTGAGGAGAGAAGTTGAGATTATGAAACATTTACCGGAGCATCCAAACATCGTGACCTTGAAGAATACATATGAAGATGATAATGCTGTTCATCTGGTGATGGAATTGTGTGAAGGTGGAGAATTGTTCGATCGGATTGTTGCGCGTGGGCATTATACTGAACGCGCCGCCGCAGTGGTCACACGGACGATTGTTGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCATCGAGATCTCAAACCTGAGAACTTCTTGTTTGGAAACAACAAAGAAACAGCGCCTCTGAAGGCTATTGATTTTGGACTGTCAGTTTTCTTTAAACCTGGTGAAAGATTTAATGAGATCGTTGGAAGTCCTTATTACATGGCTCCTGAGGTACTAAAACGAAATTATGGGCCGGAAGTAGATATATGGAGTGCTGGAGTAATTCTTTACATCCTACTTTGTGGTGTCCCGCCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAAGCAATTATAAGATCTGTTATTGATTTTAAAAGGGACCCATGGCCAAAAGTCTCTGATAATGCGAAAGACCTTGTTAAGAAAATGCTTGATCCTGACCCAAGGCGGCGGCTTTCTGCACAGGAAGTGTTAGATCATACATGGTTACAGAATGCCAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAAGGCAAGGCTAAAGCAATTCTCAGTAATGAACAAGCTTAAGAAAAGAGCTCTCAGGGTGGTTGCTGAGCATTTGTCTGTGGAAGAGGTTGCAGGAATAAAAGAGGGATTTAAGGTGATGGATACTGGCAATAGAGGGAAAATTAACATTGATGAGCTACGGGCAGGGTTGCATAAACTAGGCCATCAAATGGCCGATGCTGACGTTCAAATTTTGATGGAAGCGGGCGATACAGATAAAGATGGATACTTAGATTATGGAGAATTTGTTGCCATTTCTGTTCATCTGAGAAAGATGGGCAATGATGAGCACCTGAAGAAAGCTTTCCAATTCTTCGATCGGAACCAGAGTGGATATATAGAAATTGAGGAGCTACGCAATGCCTTAGCTGATGAAGTTGACACAAACAATGAAGAAGTCATTAATGCAATTATGCATGATGTCGACACAGACAAGGATGGAAGAATAAGTTACGAGGAGTTCGCGGCAATGATGAAAGCTGGCACAGATTGGAGGAAAGCATCAAGACAGTATTCACGAGAGAGGTTCACAAGTCTGAGTCTCAAATTGATGAGGGACGGATCCTTGACATTAAACAACGAGAATCAATGA | 1599 | 0.4309 | MGNCCVTPSGPRETKKKGKKKKENPFASDDFNYSANGGSKLAVLKDPTGREIERKYELGRELGRGEFGITYLCTDRETGEVLACKSISKKKLRTNIDIEDVRREVEIMKHLPEHPNIVTLKNTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAVVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNNKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPRRRLSAQEVLDHTWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVVAEHLSVEEVAGIKEGFKVMDTGNRGKINIDELRAGLHKLGHQMADADVQILMEAGDTDKDGYLDYGEFVAISVHLRKMGNDEHLKKAFQFFDRNQSGYIEIEELRNALADEVDTNNEEVINAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMRDGSLTLNNENQ | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1026 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 322 | - | - | |
| Mibi02g1026 | 532 | SUPERFAMILY | EF-hand | 343 | 521 | IPR011992 | - | |
| Mibi02g1026 | 532 | SMART | efh_1 | 469 | 497 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | SMART | efh_1 | 397 | 425 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | SMART | efh_1 | 361 | 389 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | SMART | efh_1 | 433 | 461 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | CDD | EFh | 433 | 495 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | Gene3D | - | 323 | 497 | - | - | |
| Mibi02g1026 | 532 | Pfam | EF-hand domain pair | 432 | 495 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | Pfam | EF-hand domain pair | 362 | 421 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 429 | 464 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 322 | IPR011009 | - | |
| Mibi02g1026 | 532 | FunFam | calcium-dependent protein kinase 13 | 142 | 322 | - | - | |
| Mibi02g1026 | 532 | SMART | serkin_6 | 56 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1026 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 478 | 490 | IPR018247 | - | |
| Mibi02g1026 | 532 | Pfam | Protein kinase domain | 56 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1026 | 532 | CDD | STKc_CAMK | 55 | 313 | - | - | |
| Mibi02g1026 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 465 | 500 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Mibi02g1026 | 532 | ProSitePatterns | Protein kinases ATP-binding region signature. | 62 | 85 | IPR017441 | GO:0005524 | |
| Mibi02g1026 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 442 | 454 | IPR018247 | - | |
| Mibi02g1026 | 532 | FunFam | Calcium-dependent protein kinase 7 | 323 | 498 | - | - | |
| Mibi02g1026 | 532 | ProSitePatterns | EF-hand calcium-binding domain. | 406 | 418 | IPR018247 | - | |
| Mibi02g1026 | 532 | ProSiteProfiles | Protein kinase domain profile. | 56 | 314 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1026 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 58 | 141 | - | - | |
| Mibi02g1026 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 357 | 392 | IPR002048 | GO:0005509 | |
| Mibi02g1026 | 532 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 50 | 490 | - | - | |
| Mibi02g1026 | 532 | FunFam | Calcium-dependent protein kinase 1 | 58 | 141 | - | - | |
| Mibi02g1026 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 176 | 188 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi02g1026 | 532 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 393 | 428 | IPR002048 | GO:0005509 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi02g1026 | Mibi-ChrMibi02 | 10115307 | 10119051 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1026 | 1 | 531 | EF-hand Containing Proteins | AT5G19450 | 79.362 | 0.0 | 890 |
Transcription factors information