Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1019 ATGGATATTTACCCATTTTTGGTATACGAAACCTTATTACGTGACTCCCCCTCCCTCCCTCCCTCCCTCCCTCGCCCTACTTTCTGTTTACGCGGAAATCTAAAATCGCAATTCTCAATTCCCACTCGCCCAGGAAAATCCGGTTATCTAAATCCCATTTCGAATTTATCTCAAAGCTGTCGGCCAAGTCTTCGTCTCGGTCTTCCTTGCGTGGCAGCTGATTCTGATCCTCCGATGGGAACTCCCGAATTCCCAGATCTTGGAAAGCATTGCGCTGTTGATGATTGCAAGTTGATTGATTTCTTGCCCTTCACATGCGATCGTTGCAATCACGTATATTGTTTGGAGCACAGAGGTTATGCTAAACATCAGTGTCAGAAAGCGGACAAACTGGATGTCACTGTTGTCATTTGTCCACTTTGTGCGAAAGGAGTCCGCCTTATTCCTGATCAAGATCCAAACATAACTTGGGAGAATCATGTCAACACTGAATGTGACCCATCAAATTATGAGAAAGCCACGAAGAAGAAGAAATGCCCCGTCCCGGGATGCAGAGAGGTATTGGTGTTCTCAAACACAATCAAATGCAGGGATTGCTTGGTGGATCATTGTCTAAAGCATCGTTTTGGCCCTGATCACAAGTGTCCTGGTCCCAAAACTTTGGAAACAAACTTTTCATTTATGAATCTCTTAAGCAGAAGTAGAAAAGAAGAGTCAAAGCCAAATTCATCTCCACCTACATCCTCTTCAAAATGGGCTTCAGGCTTTCGTAACGTGGCATCGAATATTCGAGCTTCAGCTGAAGCCAGCATGTCAAAATTGGGTAATGAAATCAACCAAGCTTGGCTAACAGCAAAGGATGGGGTGGGACAGAGCAGTGGGAGGGGTAATGAAAATGGGCAAGTGGAGATGGAGCAATGTCCACAGTGTAATGCAAAGTTTTCTTCAGTCACTTCTTTGGTGGAACATGTGCAGAAAGTTCATGAAAGGAACAGCAACCGATCCCGAGGGGCCGCGAAGGTGACCATCGATGTCTGTCCCAAATGTAGCAGAGGATTTCGAGATCCAGTGGCTCTTGTGGAGCATGTTGAGAGGGATCACGGTGGTAGTTCAAGAGCCTAG 1122 0.459 MDIYPFLVYETLLRDSPSLPPSLPRPTFCLRGNLKSQFSIPTRPGKSGYLNPISNLSQSCRPSLRLGLPCVAADSDPPMGTPEFPDLGKHCAVDDCKLIDFLPFTCDRCNHVYCLEHRGYAKHQCQKADKLDVTVVICPLCAKGVRLIPDQDPNITWENHVNTECDPSNYEKATKKKKCPVPGCREVLVFSNTIKCRDCLVDHCLKHRFGPDHKCPGPKTLETNFSFMNLLSRSRKEESKPNSSPPTSSSKWASGFRNVASNIRASAEASMSKLGNEINQAWLTAKDGVGQSSGRGNENGQVEMEQCPQCNAKFSSVTSLVEHVQKVHERNSNRSRGAAKVTIDVCPKCSRGFRDPVALVEHVERDHGGSSRA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1019 373 SUPERFAMILY AN1-like Zinc finger 76 137 IPR035896 -
Mibi02g1019 373 Pfam AN1-like Zinc finger 91 130 IPR000058 GO:0008270
Mibi02g1019 373 Pfam AN1-like Zinc finger 179 218 IPR000058 GO:0008270
Mibi02g1019 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 305 333 IPR013087 -
Mibi02g1019 373 ProSitePatterns Zinc finger C2H2 type domain signature. 307 328 IPR013087 -
Mibi02g1019 373 ProSitePatterns Zinc finger C2H2 type domain signature. 346 367 IPR013087 -
Mibi02g1019 373 ProSiteProfiles Zinc finger AN1-type profile. 85 133 IPR000058 GO:0008270
Mibi02g1019 373 MobiDBLite consensus disorder prediction 233 253 - -
Mibi02g1019 373 SMART AN1_Zf_4 91 130 IPR000058 GO:0008270
Mibi02g1019 373 SMART AN1_Zf_4 179 220 IPR000058 GO:0008270
Mibi02g1019 373 ProSiteProfiles Zinc finger AN1-type profile. 173 223 IPR000058 GO:0008270
Mibi02g1019 373 SUPERFAMILY AN1-like Zinc finger 135 220 IPR035896 -
Mibi02g1019 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 344 372 IPR013087 -
Mibi02g1019 373 Gene3D - 79 135 IPR035896 -
Mibi02g1019 373 SMART c2h2final6 177 207 IPR013087 -
Mibi02g1019 373 SMART c2h2final6 344 367 IPR013087 -
Mibi02g1019 373 SMART c2h2final6 305 328 IPR013087 -
Mibi02g1019 373 Gene3D - 158 229 IPR035896 -
Mibi02g1019 373 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 83 335 - -
Mibi02g1019 373 Gene3D Classic Zinc Finger 271 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1019 Mibi-ChrMibi02 10049187 10052987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1019 79 373 C2H2 Transcription Factor Family AT2G41835 64.883 1.01e-125 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1019 zf-AN1 1.5e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1019 02 10049187 10052987 Mibi02g1019 02 10049187 10052987 ECH