Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1002 ATGGCTTCCTCTTCCTCTGACCCTAGCAAGTCCGAAGTTGGCTGCTGTGGCGGCGGCGGTAGTGCAGAGGTTTCGGATGCAGCGATGGCAAATGATAAGCTCTTGATCTATAGAGGATTGAAGAAAGCGAAGAAAGAAAGAGGTTGTACAGCTAAAGAGCGCATCAGCAAGATGCCTCCTTGTGCTGCGGGGAAACGAAGCTCTATATATCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCCCATCTTTGGGATAAAAGTACATGGAACCAGAATCAGAATAAAAAGGGGAAACAAGGTGCATATGATGACGAGGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCCCTGAAATACTGGGGTCCAGGGACTTTAATCAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGAAAAGTGTTTCAAGAGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGAATTTCTAAATATCGTGGACTCTCCAGCCGATGGGAGCCATCATATGGTAGAATGGCTGGATCTGATTACTTCAACAGTATACATTATGGAACAGGTGATGATTCAGCAGCGGAAAGTGAGTATGTTGGTAGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACCTGAAATGGTGGGGATCCAATAAAAGTCGGCTACCTGATGCTGGAACAAAATCATCAGAAGAAAAGAAACAAGGATTTGCAGGGGATATCTGTGGTGAGCTCAAAACGCTGGAACAGGAACTCCAACCCTCTGAGCCATACCAGATGCCACAGTTAGGCTTGCCCCATGATAGGAAAAAGCATAAAAGTTCCGCGCTCTCTGCCCTGAGTATTTTATCTCGGTCAGCAGCCTACAAGAGCCTGCAAGAGAAGGCGTCAAAGATACAAGAAAATTACACTGATAACGATGAAGATGAGAACAAAAGCACCATCAATAAGTTGGACCATGGTAAGGCACTTGAGAGATCACCAAATCATAATGGTGTGGATGAAAGGCTTGACATTGCGATGGGAATGAGCGGGGCGTTGTCTATTCAAGGAAATGTTTACCCATTGACTTCATTCTTGTCTGCACCACTTTTGACAGCCTATAATACTGCCGATCCCATGCTAGATCCTGTTCTTTGGACATCTCTTGTTCCTATGCTTCCTGCTGGGCTTTCTCGGACATCTGAGGTTACCAAAACCGAGAGCAGTTCAACTTACACCATATTTCAGCCTGAGGAGTAA 1272 0.4505 MASSSSDPSKSEVGCCGGGGSAEVSDAAMANDKLLIYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMKSVSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYVGSFCIERKIDLTNYLKWWGSNKSRLPDAGTKSSEEKKQGFAGDICGELKTLEQELQPSEPYQMPQLGLPHDRKKHKSSALSALSILSRSAAYKSLQEKASKIQENYTDNDEDENKSTINKLDHGKALERSPNHNGVDERLDIAMGMSGALSIQGNVYPLTSFLSAPLLTAYNTADPMLDPVLWTSLVPMLPAGLSRTSEVTKTESSSTYTIFQPEE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1002 423 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
Mibi02g1002 423 MobiDBLite consensus disorder prediction 310 341 - -
Mibi02g1002 423 Pfam AP2 domain 69 124 IPR001471 GO:0003700|GO:0006355
Mibi02g1002 423 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 300 - -
Mibi02g1002 423 Gene3D AP2/ERF domain 69 134 IPR036955 GO:0003700|GO:0006355
Mibi02g1002 423 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Mibi02g1002 423 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Mibi02g1002 423 SUPERFAMILY DNA-binding domain 68 133 IPR016177 GO:0003677
Mibi02g1002 423 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Mibi02g1002 423 FunFam AP2-like ethylene-responsive transcription factor 68 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1002 Mibi-ChrMibi02 9907312 9911347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1002 30 407 AP2-EREBP Transcription Factor Family AT2G41710 65.464 8.05e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1002 AP2 2.1e-09 CL0081