Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1001 ATGGAAAGAGGTGGATATGGCCATCGCGGCGCCGGCAGCTACAGGGGAGGTCCGAGAGGCAGATCTGGCAGGGGAGGAGGATTTGACGGTGGTCGAGGCCCCCGTCAACAACAACACTCTTACAATGATGATCGCTCTGGCAGGGGAGGAGGATTTGACGGTGCCAGAGGCAGAGGCAGAGGCAGAAGAGGTCGAGGAAATTCTAGGGATAGTGTTTGGGTGCCCAATGAACCGCCTCAACCTCACAATCCTGCCCCGTCTCCAGTTCCTGAACTGGAACAACTACGAATTTCACAACCACAACCAGCTCAAAGCTCATCTCATACCCAAGAGACAAAAGATAAGATTTTGCCCGTTCATCGGCCTGACAAGGGTGGTACTTTGGCGATTCGAACTTGTAAGCTCCGGGTCAATCACTTTCCTCTTAGGTTTAGGCCTGACACCGTACTCATGCATTACAATGTTGATGTGAAGCCCATTTCTCCGGCCAGACCTGGTCGACCTCAAAGAATATCAAAGTCTGACCTCTCTATGATTAGGGATACGTTGTTTTCTGGGGACACGAGGTTGCCATTAGATCAGACTGTGTATGATGGAGAAAAGAACATTCTCAGTGCAGTTCCTTTGCCAGAAGAAACCTTCACAGTTACTATCTCTGCGGGAGAAGATGATAGAAACTATTCATATGAGGTCACCTTAACACTAGTTAATAAGCTTGAGTACCGCAAGTTGAGCCAATACCTCAATAAGGAGCTTATGTCAGTTCCTAGAGACATATTGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCAAGCGTACAATCTCTATGGGACGTCGTAGCTTCTATCCTTCAAATCCTCCTTTGCTGCATCAGGATCTTCACTATGGCATAATTGCCTTAGGGGGGTTTCAACACAGTTTGAAGCCTACATCTCAGGGTTTATCCTTATGTCTGGACTACTCTGTTTTATCTTTCCGAAAGCAAATGTCAGTCTTGGATTTTCTATATGAGCGTATTTATGGTTTTAAATTGGAGCAATTTGGACGTTACAGGGGTGACGTTGAGAGGGAATTGATTGGTTTAAAGGTAAATGTGACACATCGCAGAACTAGACAGAAATACACCATTTTGGGGTTATCAAAAGGTAACACAAGGCATATCACCTTTCCTCTTACGGACCCAGATGGTCGGAATGACCCACAAGAAATTTCAATTGTTGACTATTTCTTGGATAAATACAGTAAGGATATTGCATACAAAGATATTCCTTGTTTAGCTTTTGGGAAAGGTGTCTTAGTGCCAATGGAGTTCTGCATCTTAGTGGAGGGTCAGAGATATCCCAAAGAGGATTTGGACAAACAAGCTTCCAAGGCTTTGAAAGATATGTCATTGGCCCCTCCAAAAATGAGACAGAATGTTATACAAGCAATGGTGGAGTCAAGTGACGGACCTTGCGGTGGTGGTATTATTCAAAACTTTGGTATGGAAATCAACACAAAAATGACTTCTGTTTTAGGACGCATTATTGAGCCACCAAAATTGAAAGTAGGTGGTCGGGATAGGCGGATTATGACAATAACATTGGATCCACAAAGATGTCAATGGAATCTAGTTGGAAAATCTGTGATGCAAGGTAAGCCGATCAATTGTTGGGGCATGATTGATTTTACAAGCACAGAGAGAAATTTCCGGTTTAAATTAAGGTGTGAAGAATTCATTCCCAACCTCAAGAAAAAATTCATAAGTTTGGGCATTGACATGAATGATCCTCTTTGGGTTGAACGATCTTCGATGCGTCAACTTGAAAGTCATGGTTCGTTGTCTGCGTTACTCACGAAAGTGAACAATTGGGGTCAAGTGCAATTCATTTTGTGTGTGATGTCTCAGAAACATGTTGGTTACAAGTTGCTCAAGTGGATTTCAGAGACCAAGGTTGGTGTAGTGACGCAATGTTGTTTGACTGAAACTGTGAATGCTGGAAAAGATCAGAATCTTACAAATCTTGCTCTCAAGATCAATGCAAAACTTGGAGGTAGTAATGTTGAGCTTGAGAATAGGCTCCATTGCTTTGCAGGTGATAATAAGCATGTTATGTTTATAGGGGCAGATGTGAATCATCCTGCTGCACGAGACATTAATAGTCCATCGATTACTGCGGTGGTCGGAACTGTCAATTGGCCCGCTGCGAATCGGTATGCAGCACGTGTTAGCCCTCAACCCCATCGTAAGGAACAAATATTGAATTTTGGAACAATTTGTCTTGAGCTTGTTGATTGTTACAGAAGGTTGAACATTGTAAGACCAGATAAAATTGTTATTTTCCGTGATGGGGTAAGTGAGGGACAATTTGAGATGGTTCTTAATGAAGAATTGCGAGATCTGAAAAGTGTTTTTCAAAGGGAAAAGTATTTTCCAACTATAACTTTGATCGTAGCTCAGAAGCGACATCAGACTAGATTGTTTCAAGAGGAGCCCTCTTTTGGAAATGTGTCTCCCGGAACGGTGGTGGACACAAAAGTGGTACACCCCTTTGAGTTTGATTTCTACCTTTGCAGTCACTATGGAAGCTTAGGGACCAGCAAGCTTACTCACTATCATGTCTTGTGGGATGAGCACAGCTTTACCTCCAATGACTTACAAAAGCTCATTTATGATATGTGTTTTACCTTTGCTAGGTGTACTAAACCTGTATCTTTGGTCCCTCCTGTGTACTATGCTGACCTTGTTGCCTATCGAGGACGGCTGTACTATGAAGCAATGGCATTGGGTCCTTCTTCATCTGCAAATGAACACAAGTATTTCAAGCTGCATGAGCACTTGGAAGATATGATGTTCTTTGTCTAA 2850 0.4302 MERGGYGHRGAGSYRGGPRGRSGRGGGFDGGRGPRQQQHSYNDDRSGRGGGFDGARGRGRGRRGRGNSRDSVWVPNEPPQPHNPAPSPVPELEQLRISQPQPAQSSSHTQETKDKILPVHRPDKGGTLAIRTCKLRVNHFPLRFRPDTVLMHYNVDVKPISPARPGRPQRISKSDLSMIRDTLFSGDTRLPLDQTVYDGEKNILSAVPLPEETFTVTISAGEDDRNYSYEVTLTLVNKLEYRKLSQYLNKELMSVPRDILQGMDIVFKENPAKRTISMGRRSFYPSNPPLLHQDLHYGIIALGGFQHSLKPTSQGLSLCLDYSVLSFRKQMSVLDFLYERIYGFKLEQFGRYRGDVERELIGLKVNVTHRRTRQKYTILGLSKGNTRHITFPLTDPDGRNDPQEISIVDYFLDKYSKDIAYKDIPCLAFGKGVLVPMEFCILVEGQRYPKEDLDKQASKALKDMSLAPPKMRQNVIQAMVESSDGPCGGGIIQNFGMEINTKMTSVLGRIIEPPKLKVGGRDRRIMTITLDPQRCQWNLVGKSVMQGKPINCWGMIDFTSTERNFRFKLRCEEFIPNLKKKFISLGIDMNDPLWVERSSMRQLESHGSLSALLTKVNNWGQVQFILCVMSQKHVGYKLLKWISETKVGVVTQCCLTETVNAGKDQNLTNLALKINAKLGGSNVELENRLHCFAGDNKHVMFIGADVNHPAARDINSPSITAVVGTVNWPAANRYAARVSPQPHRKEQILNFGTICLELVDCYRRLNIVRPDKIVIFRDGVSEGQFEMVLNEELRDLKSVFQREKYFPTITLIVAQKRHQTRLFQEEPSFGNVSPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKLTHYHVLWDEHSFTSNDLQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYEAMALGPSSSANEHKYFKLHEHLEDMMFFV 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1001 949 Pfam Piwi domain 625 919 IPR003165 GO:0003676
Mibi02g1001 949 Pfam Argonaute linker 1 domain 280 329 IPR014811 -
Mibi02g1001 949 ProSiteProfiles PAZ domain profile. 356 444 IPR003100 GO:0005515
Mibi02g1001 949 SMART DUF1785_2 277 330 IPR014811 -
Mibi02g1001 949 SMART PAZ_2_a_3 335 470 IPR003100 GO:0005515
Mibi02g1001 949 Gene3D paz domain 326 448 - -
Mibi02g1001 949 ProSiteProfiles Piwi domain profile. 624 920 IPR003165 GO:0003676
Mibi02g1001 949 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 131 921 - -
Mibi02g1001 949 CDD PAZ_argonaute_like 331 443 - -
Mibi02g1001 949 Pfam PAZ domain 351 457 IPR003100 GO:0005515
Mibi02g1001 949 Gene3D - 695 949 IPR036397 GO:0003676
Mibi02g1001 949 Gene3D - 510 687 - -
Mibi02g1001 949 MobiDBLite consensus disorder prediction 49 67 - -
Mibi02g1001 949 MobiDBLite consensus disorder prediction 1 125 - -
Mibi02g1001 949 MobiDBLite consensus disorder prediction 97 112 - -
Mibi02g1001 949 SMART Piwi_a_2 624 920 IPR003165 GO:0003676
Mibi02g1001 949 CDD Piwi_ago-like 491 919 IPR045246 -
Mibi02g1001 949 SUPERFAMILY PAZ domain 327 481 IPR036085 GO:0005515
Mibi02g1001 949 Pfam N-terminal domain of argonaute 131 266 IPR032474 -
Mibi02g1001 949 SUPERFAMILY Ribonuclease H-like 621 920 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1001 Mibi-ChrMibi02 9901254 9904958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1001 85 920 Eukaryotic Initiation Factors Gene Family AT1G48410 35.017 6.79e-142 448