Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0991 ATGGATCACAGAAGGCAGTCCAAGGATTCGCTCTCGTACTCTAGTCTTTTCAATCTCGAGTCTTTGGTGAATTTTCAACTTCCACAAGAAGATGATGATTTTGATTATTATGGGAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGGTGGGGCAATCGCAATTCACAGCAATGGGAATATGCGTGGAAGGGAGGTAAATTTGTTGAAGAGGAAGTGGTCTCAAAACAGTGACGACGAAGACAAGGGTAATTTTTGTGGAACACGCATGACTGAGGAGCGATACCGATCAATGCTCGGGGAACATATTCAAAAATACAAGAGGAGGTGTAAAGATACCTCATCTAGTCCTGCCCAAAATCGTGTTAGCGCTCAACTTGTCAAAAGTAACATAGGTTCGAAAGCGTCAAAGTTAGTGAATGAGCGCCGAGGAGGAACACATGTTCTGGAGAGTACATCTGAGTGGCTTAATGATATTAATCCTCAGAAACCTGTAAACTACCGTGATGCAGAATCCAGACAGCAATATGGGCCTGATAGAACTATCTATGAACCAGCTTCTTTAGATATTGGAGATGGCGTTACCTACAAAATTCCACCTCCTTATGATAAGTTGGCGGCAATGCTGAATCTTCCAAGTTTCTCTGATATCCGAGTTGAGGAATTTTACTTAAAAGGTACCTTGGATTTGGGATCCTTGGCTGCAATGATGGCTTCTGATAAGAGGGGCGGGACTAGAAACCGGGCAGGCATGGGCGAAACAGTACCTCAACACGATTCACTTCAGGCACGGTTGAAGGCCGTGTCAGCTTCTAATTCACCTCATCAATTTAGTCTGAAAGTATCTGATATTGGTCTGAATTCTTCCATCCCAGAGGGAGCTGCTGGAAATATTAAGCGATCTATTTTGTCCGAGGGTGGTGTATTGCAGGTTTATTATGTGAAGGTTTTAGAGAAAGGTGACACGTATGAGATCATTGAAAGAAGCCTACCTAAGAAGCAAAAGGTAAAGAAAGACCCTTCTTTGATTGAGAAGGAGGAAATGGATAGAATTGGAAAAGTTTGGGTAAATATTGTAAGAAGAGACATGCCAAAGCATCATAGGTTTTTTACTGGCTTCCATCGTAAGCAGCTCATTGATGCCAAGAGGTTCTCAGAGAACTGTCAAAGAGAGGTTAGAATGAAAGTGAGTAGATCACTTAAATTCATGAAGGCTGCACCCATGCGCACCCGAAAAATAGCTAGAGATGTCATGCTGTTCTGGAAACGAGCAGATAAGGAGATGGCAGAATTGAGGAAAAAAGAGGAGAAAGAAGCTGCAGAAGCTTTGAGGCGTGAACAGGAGCTTCGTGAAGCAAAGAGGCAGCAGCAAAGGCTGAATTTCCTTATACAGCAAACTGAGCTATACAGTCACTTTATGCAGAACAAGTCAAACTTACTGTCCTCTGATGCTTTACCTACAGTAGATGAAAAAACAGATGATCAAGATGCGGAACCTGGCTCTTCAGATGCTGGGCCTAGTGAGGAGGAAGATCCTGAAGAGGCTGAACTGAAGAAGGAAGCTTTGAAGGCTGCTCAAGAAGCTGTCTCTAAGCAGAGAAAGTTGACGAGTGCTTTTGATAGTGAATGCTTGAGGCTGCGTCAGGCTGGTGAAACTGATGCACTTTCGCAGGAAGTTGCAGGGGCAAGTAACATTGATTTGCAAACCCCCTCAACCATGCCTGTGGCATCAACAGTTCGGACACCAGAAATGTTTAGAGGCTGTCTTAAAGAATATCAGCTAAAAGGTCTTCAGTGGTTAGTTAATTGTTATGAGCAGGGTCTGAATGGTATTCTTGCTGATGAGATGGGACTTGGAAAGACCATTCAAGCCATGGCTTTTTTAGCCCATTTAGCGGAGGAGAAAAATATTTGGGGACCATTTTTGGTTGTTGCACCTGCATCAGTATTGAACAACTGGAATGAAGAACTTGAGCGCTTCTGCCCTGACATGAAAGCTCTTCCTTACTGGGGCGGGCTTCATGAGCGGACAGTACTTAGGAAAAGTATTAACCCAAAGGATCTTTATCGTAGGGAAGCAAAATTCCACATTCTCATTACAAGCTACCAGCTACTAGTATCTGATGAGAAGTATTTTCGGCGTGTGAAATGGCAGTATATGGTATTAGATGAAGCCCAGGCAATTAAAAGTTCAAACAGTATAAGATGGAAGACACTCCTCAGTTTTAATTGTCGGAATCGCCTGCTGCTGACTGGTACGCCAATTCAAAATAATATGGCAGAATTGTGGGCTCTTCTGCACTTCATTATGCCAACTTTATTCGATAGCCATGAACAGTTCAATGAATGGTTTTCAAAAGGAATTGAGAACCATGCAGAACATGGAGGTACTTTGAATGAACATCAACTTAACAGATTGCATTCTATTCTAAAGCCTTTCATGCTGCGACGAGTTAAAAAAGATGTAATATCCGAATTGACCAGGAAAATGGAGGTTACAGTGCATTGCAAGTTGAGTTCTCGGCAGCAAGCTTTCTATCAAGCAATCAAGAATAAAATATCTCTTGCTGAGTTGTTTGATCGTAATCGTGGGCAGCTCAACGATAAGAGAATTCTGAATTTAATGAACATTGTTATTCAACTAAGAAAGGTCTGCAACCATCCAGAGTTGTTTGAGAGGAGTGAGGGAACTACATTCTATAATTTTGCAGAGATTCCAAATTCCCTTCTGCCTCCTCCATTTGGGGAGTTAGAGGATGTATACTATTCTGGGGGTCACAATCCAATATTATACAAGATGCCAAAGCTTGTCTATCAAGAAATCATGCAAGGTTCTAAATTGTTCAGTTCAACAATTGCTCGTGGTGTGAGCAGAGAACTTTTTCAAAGACATTTTAATATTTATAGGCCGGAGAATGTTTTTCAATCAATCTTCTCTGAAGGGAATAAATCAAATGCGTCATTTATTAAAAGTGGAACTTTTGGTTTTACCCATTTGATGGATCTGTCCCCGCAAGAAGTGATGTTTTCAGCTACTGGTTCTTTTATGGAGCAAGTACTGTTTTCTATGGTGAAATGGGAGCAGAAGTTTATTAATGAAGTTGCAGACTTTGTGATGGAGACTATAGATAATGATCCAGAATACAGTTACCTTGAAAGAGGAAAAGTGAGGGCTGTCACACGAATGTTATTGGTGCCAACAAAATCCGAGACGGAGATTTTTCGTAGAAAATTTGCTACTGGCCCCAGCTATGCCCCTTTTGAGGCACTGGTTGTCCCATACCAAGATAGGATTATATCCAGTGCAAGAATTATTCACTCATCATACACATATATCCCTCGGACTAGAGCTCCCCCAATTGTTGCCCACTGCTCAGACCGAAGCTTCTCTTATAAAACACTTGAAGAGTTGCATGACCCTTGGGTTAAGAGATTGCTTGTGGGATTTGCACGTACATCTGAGTTTAATGGACCTAGAAAGCCGGATGGTCCTCCCCATCATTTAATTCAAGAGATTGATTCTGAACTACCAGTTGCACAGCCTGCTCTTCAGTTAACCTACAAAATTTTGGGTTCATCTCCCCCTATGCAAAATTTTGACCCAGCGAAATTGCTCACTGACTCTGGGAAGCTTCAAACACTTGACATATTATTAAAACGCTTGCGGGCTGAGAATCATCGTGTTCTCTTGTTTGCTCAGATGACTAAGATGCTGAATATTCTTGAGGACTACATGAACTATAGAAAATATAGATATTTTAGACTTGATGGATCGTCCTCTATTCAGGACCGCAGAGACATGGTTAGAGACTTCCAGCAGAGGAATGATGTTTTTGTGTTCTTACTTAGTACAAGAGCTGGTGGATTGGGTATCAACTTGACGGCTGCTGACACAGTAATCTTTTATGAGAATGATTGGAATCCCACATTGGATCAGCAGGCAATGGATAGAGCTCATCGATTGGGTCAAACAAAAGATGTTACTGTTTACAGACTTATCTGTAAAGAGACAGTTGAAGAGAAGATTCTTATTAGAGCAAGTCAAAAAAGCACTGTACAGAACCTTGTCATGACTGGTGGTTCTACTGATGATATTTTAGCTCCTGAGGATGTTGTATCTTTGCTTCTGGATGATGTGCAGTTGGAGCAGAAATTCAAGGAAATTCCTCTTCAGGTAAAAGATAAGCAGAAGAGGAAGCAACCTGTGAAGGGTATACGGGTAAATGAAGAAGGTGATGCGTCCCTGGAAGATCTAACAAACACTGGAGCACAGGGCCCAGATAATGATATTTCTCTTGACCCAGAGGGATCAAAACCCAGCAATAAAAAGAGAAAAGCTGCCTCTGACAAGCAAACCGCATCAAGGGCAAGGAATGTTCAAAAGGTGAATGAATTTAATGGTAGTTCAACGCCAATGGAGTACGAGCTGTATGATGCTGCTCAAAATACTGATCCGGTGGTCCAGAAACCCAAAAGATCAAAGAAGGCAAAGAAAGTTGGGAATGACAAGTTTGACGACTCTTTTGCTGGTACAGTCGATGTATTCCCAGAGTAG 4554 0.4185 MDHRRQSKDSLSYSSLFNLESLVNFQLPQEDDDFDYYGNSSQDESRDSQGGAIAIHSNGNMRGREVNLLKRKWSQNSDDEDKGNFCGTRMTEERYRSMLGEHIQKYKRRCKDTSSSPAQNRVSAQLVKSNIGSKASKLVNERRGGTHVLESTSEWLNDINPQKPVNYRDAESRQQYGPDRTIYEPASLDIGDGVTYKIPPPYDKLAAMLNLPSFSDIRVEEFYLKGTLDLGSLAAMMASDKRGGTRNRAGMGETVPQHDSLQARLKAVSASNSPHQFSLKVSDIGLNSSIPEGAAGNIKRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPSLIEKEEMDRIGKVWVNIVRRDMPKHHRFFTGFHRKQLIDAKRFSENCQREVRMKVSRSLKFMKAAPMRTRKIARDVMLFWKRADKEMAELRKKEEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLLSSDALPTVDEKTDDQDAEPGSSDAGPSEEEDPEEAELKKEALKAAQEAVSKQRKLTSAFDSECLRLRQAGETDALSQEVAGASNIDLQTPSTMPVASTVRTPEMFRGCLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPDMKALPYWGGLHERTVLRKSINPKDLYRREAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVISELTRKMEVTVHCKLSSRQQAFYQAIKNKISLAELFDRNRGQLNDKRILNLMNIVIQLRKVCNHPELFERSEGTTFYNFAEIPNSLLPPPFGELEDVYYSGGHNPILYKMPKLVYQEIMQGSKLFSSTIARGVSRELFQRHFNIYRPENVFQSIFSEGNKSNASFIKSGTFGFTHLMDLSPQEVMFSATGSFMEQVLFSMVKWEQKFINEVADFVMETIDNDPEYSYLERGKVRAVTRMLLVPTKSETEIFRRKFATGPSYAPFEALVVPYQDRIISSARIIHSSYTYIPRTRAPPIVAHCSDRSFSYKTLEELHDPWVKRLLVGFARTSEFNGPRKPDGPPHHLIQEIDSELPVAQPALQLTYKILGSSPPMQNFDPAKLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSSIQDRRDMVRDFQQRNDVFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDQQAMDRAHRLGQTKDVTVYRLICKETVEEKILIRASQKSTVQNLVMTGGSTDDILAPEDVVSLLLDDVQLEQKFKEIPLQVKDKQKRKQPVKGIRVNEEGDASLEDLTNTGAQGPDNDISLDPEGSKPSNKKRKAASDKQTASRARNVQKVNEFNGSSTPMEYELYDAAQNTDPVVQKPKRSKKAKKVGNDKFDDSFAGTVDVFPE 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0991 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 1362 IPR027417 -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 488 523 - -
Mibi02g0991 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 817 IPR027417 -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 1452 1470 - -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 41 55 - -
Mibi02g0991 1517 Pfam DNA-binding domain 350 478 IPR020838 GO:0003677
Mibi02g0991 1517 SMART ultradead3 585 780 IPR014001 -
Mibi02g0991 1517 SMART helicmild6 1239 1322 IPR001650 -
Mibi02g0991 1517 Pfam Helicase conserved C-terminal domain 1213 1322 IPR001650 -
Mibi02g0991 1517 Pfam SNF2-related domain 604 891 IPR000330 GO:0005524|GO:0140658
Mibi02g0991 1517 PANTHER HELICASE SRCAP-RELATED 90 527 - -
Mibi02g0991 1517 Gene3D - 585 826 IPR038718 -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 33 59 - -
Mibi02g0991 1517 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 601 772 IPR014001 -
Mibi02g0991 1517 CDD SF2_C_SNF 1201 1333 - -
Mibi02g0991 1517 FunFam DNA helicase INO80-like protein 1181 1431 - -
Mibi02g0991 1517 ProSiteProfiles DBINO domain profile. 354 479 IPR020838 GO:0003677
Mibi02g0991 1517 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1213 1396 IPR001650 -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 1393 1517 - -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 1436 1451 - -
Mibi02g0991 1517 Gene3D - 827 898 IPR027417 -
Mibi02g0991 1517 Gene3D - 1180 1417 IPR027417 -
Mibi02g0991 1517 Coils Coil 426 465 - -
Mibi02g0991 1517 FunFam Putative DNA helicase INO80 561 839 - -
Mibi02g0991 1517 MobiDBLite consensus disorder prediction 1393 1413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0991 Mibi-ChrMibi02 9765313 9777107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0991 610 891 RAD5 or RAD16-like Gene Family AT5G43530 29.664 6.58e-27 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mibi02g0991 SNF2_N 6.7e-67 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0991 02 9765313 9777107 Mibi02g0991 02 9765313 9777107 ECH