Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0977 ATGCCTTCGTCTCCAATCCCTATCGGTAACTGCGAGATTATCGTTGAAGCCAAAAGGTTTACCTGTAAGTCGGATTCAAACAGCCTCCAGATTTCTCTTCCCACTAGCGGGAAGATTAAAGTATCAGTTTTGAAAGGCGATGTTACGAATAAAGGAAGTGATTCTGAGAATTTTAAGCTCGAAGATAGAGATCATGAATTCGTCCTTGTTAATCCTAAAGACGCCGACGGCACTAGCAAATCCTACCTGCAGGAAGTATTGCAGATGTATATGAGAGAACTCCCTGCAATGAATTTTGCTGCAAATACTGGAAAGCAATCGAAATTTCTTGAAAGATGTGTAACTAATGGGAAATATCGTACACTGCTTATGAAATCTGGTTCTGTTGGAAATTCTGGGAAGGTTATAGCTGCCATTACGTATCAAATAGTCCCTGCAGATACAGCGTATGCAGAGATCCCACTTGCAGCGGTTAGTGCAATCCATCAACGCAAGGGTCTTGGTCATATGTTGTTTGTAGAGCTACGGAAGAGACTTCAACATGTTGGTGTTAGTTCAATTTTCTGCTGGGGGGACAAAGAATCTGAAGGGTTCTGGCTTAAACAGGGTTTCATATCAATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAGGCTGCCTATAAAAGCTGATATTCGTAAAGCGTTATGCTTTCCTGGTGGTTCTACTCTCATGGTTTGCCATCTAAAGATGGAATTTTTAGCTGAGGCCACTAACCCTATGAAGTGTCTTCTCTCACAACAACATCCGAATCACTTGACAAACGGAAATGCTGAGAACGACCAGCTTAAATTTACGGGACAGTTACATATTGATTTGAACTTTTCAAATAACTGTGCAGATAGAACAGATAATATGGAGACCAATCATCCTAAGGCTTTGGTGAATGATGAGTTATCAAGAGATTTTGATAAATTGAGCAATGGTGACTCACTGCCCGCTGTTGCAGGACTTGCAAACGATGGAGTTGATGCTGAAATGAATTGTTCCACTTCCGCAAAAGGTGCAAAGAGGATTTGGGAAGCCTCTTTGTCATCATTAAAGTCAAAAAGAGTGAAAGGAAGCCATTTAGTTGATGGTAGATCAGAGTCTAGCTGGGGTTTTATCTCAGAGGTTGATAGGACTGATTCTTGTTTTGTGGAATGCTCATGGGGCGTTTCAAATGGGCAAAGTTCAGCGGAGCTCCCATGTGGTGATTCTTTGATTGTCCAAAAACAGAATTCTGAGAAACTCAAAGGGCATTATTTACATTTAGAGGCTCAAGTTAACCATGAACAAATATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATTGCTGATGATGCTAAGAAAACGCACCTTACAAAGGTAATTGAATCCCTTGGTGGCACTGTTACTTCTGAAGGAAGCATGGCCACACATGTTATCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGCACTGCCCTCTGCTCAGGGGCTTGGGTGGTCTCTTCAGATTGGTTGAAAGAAAGCTACCGTGAAGGCAAATTTGTTGATGAGCTGGCTTACATATTAAATGACGAGGATTATCTATCGAAGTACAAATCTGATTTGAAAAGTGCAGTTTTCCGTGCAAAAGCCAAATCCGGAGCTTTGTTCAAGGGGTACAATGTGTGCATTGCTGATCATGTTCAGCCTCCTGCTAAAACACTATCTGCAATTGCGAGCTCTGCTGGTGGCAATGTTATTTGTGGGTTGAAGAAAGTAAATGAAGCATCCTCAACCATTTTCGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGAACTTTCAGTAGTGAGTGGTTTATGAATTGTGTTATGAGGCAGGAACTTGACATGAAGGCATTTCAATTTGCAGAGTCTTTATGA 1938 0.4149 MPSSPIPIGNCEIIVEAKRFTCKSDSNSLQISLPTSGKIKVSVLKGDVTNKGSDSENFKLEDRDHEFVLVNPKDADGTSKSYLQEVLQMYMRELPAMNFAANTGKQSKFLERCVTNGKYRTLLMKSGSVGNSGKVIAAITYQIVPADTAYAEIPLAAVSAIHQRKGLGHMLFVELRKRLQHVGVSSIFCWGDKESEGFWLKQGFISIAEVDTKGRARRLPIKADIRKALCFPGGSTLMVCHLKMEFLAEATNPMKCLLSQQHPNHLTNGNAENDQLKFTGQLHIDLNFSNNCADRTDNMETNHPKALVNDELSRDFDKLSNGDSLPAVAGLANDGVDAEMNCSTSAKGAKRIWEASLSSLKSKRVKGSHLVDGRSESSWGFISEVDRTDSCFVECSWGVSNGQSSAELPCGDSLIVQKQNSEKLKGHYLHLEAQVNHEQISTKQCFRIMLMNIADDAKKTHLTKVIESLGGTVTSEGSMATHVITGKVRKTLNFCTALCSGAWVVSSDWLKESYREGKFVDELAYILNDEDYLSKYKSDLKSAVFRAKAKSGALFKGYNVCIADHVQPPAKTLSAIASSAGGNVICGLKKVNEASSTIFVTCEEDMEEAMVAAKKGIRTFSSEWFMNCVMRQELDMKAFQFAESL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0977 645 Gene3D - 64 220 - -
Mibi02g0977 645 Gene3D BRCT domain 432 551 IPR036420 -
Mibi02g0977 645 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 437 527 IPR001357 -
Mibi02g0977 645 ProSiteProfiles BRCT domain profile. 550 634 IPR001357 -
Mibi02g0977 645 ProSiteProfiles BRCT domain profile. 448 527 IPR001357 -
Mibi02g0977 645 CDD BRCT_MDC1_rpt1 446 520 - -
Mibi02g0977 645 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 61 243 - -
Mibi02g0977 645 SUPERFAMILY BRCT domain 554 634 IPR036420 -
Mibi02g0977 645 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 84 211 IPR016181 -
Mibi02g0977 645 Gene3D BRCT domain 552 644 IPR036420 -
Mibi02g0977 645 SMART BRCT_7 438 517 IPR001357 -
Mibi02g0977 645 SMART BRCT_7 552 632 IPR001357 -
Mibi02g0977 645 CDD NAT_SF 131 190 - -
Mibi02g0977 645 CDD BRCT_PAXIP1_rpt6_like 554 635 - -
Mibi02g0977 645 Pfam Acetyltransferase (GNAT) family 131 204 IPR000182 GO:0016747
Mibi02g0977 645 SUPERFAMILY BRCT domain 447 529 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0977 479 586 Core DNA Replication Machinery Family AT4G02110 27.679 6.46e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mibi02g0977 RTT107_BRCT_5 5.2e-07 CL0459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0977 02 9648311 9654440 Mibi02g0977 02 9648311 9654440 ECH