Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0929 ATGTCACGGTGTCCCTCCCCCTCAATGAGCTGTAACTCACAGCTTGCTTTGACAACCCCTTCAAGCTTTCTCTCTGCTTCAAACTCATTGCCAAATCTTGGACCTTTCATCGTGAAAGATCAGAAATTTTCGATTCTTCAGCATTCTCAGTTTTGTGTGTATATCTTTGTTACATATGACAGCGGAAGAAGACGAAGGAAAGTTGGAGTTGGGGAAGACGGTGTTGGAAACCCTGTGGAGATGCCTTACCTTGTCCGAGAAAATTTGTTTATTGGCAATATCAGTGACGCTGCGGAGGTCCTTCAAAACGGTAGCGATGAAATCACCCATATTTTATCGGTTCTTAGCTCTGATTCAATATCATTCTTTTCTGAATGGCGAAGTAACCTAACGATTCCGGCAAAGGAAATTAAGAAGGTATATGTGGGTGATGGTCCTGGTGGTGCTTCAGATGATGGCTTGGGTGATATATCAAGGAGTCCGTTAGCATCGGAGAGCCTTTTGTACTCGTTGGAATATGCAGGTAAGGATTTGAAGTTGGTCAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATTTGTTGGATTACTTGGATGTTTGCCTCAATTTTATTGATCGAAGCAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCATATTTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTAGAACAGTTAAAAATGTTTGAGGAGATGGGCTTTAAGGTAGATCGCTCTAGCTCTATATACAGGCGCTTTCGCTTGAGAGTATTGGGAAAGAATTATAACTCAGGGGTAAGAATAGACAGTTCTAGACTAGGACCTGATCCTGGCATGCCTGTTAGTGTTGCTTCAGAAGTAGGAGCTCCAAGAGCAGGAAATAACCGTAGTCCTACTTATCGCTGTAAGAAGTGCCGGCGTGTTGTTGCATTGAAGGAACATGTTGTAGACCATATTCCAGGTGAAGGTGAGACATTCGGCGAGTGGCAGAAGTGGAGAAGTGATAGTCTCGTTGACAAATACAATGAATCTGAGTGTTCTTCCATATTTATTGAGCCACTACAATGGATGAAAGCAGTTGAGGAAGGTGCATCAGAGGGGAAGTTGAACTGTGCCCATTGTGACGCCCGCTTGGGAAACTTCAATTGGTTTGGCATACAATGCAGCTGCGGAAGCTGGATAACCCCTGCCTTTCAGATCCACAAGTGCCGAGTGGATGCAAGCCCTCAATAA 1332 0.4377 MSRCPSPSMSCNSQLALTTPSSFLSASNSLPNLGPFIVKDQKFSILQHSQFCVYIFVTYDSGRRRRKVGVGEDGVGNPVEMPYLVRENLFIGNISDAAEVLQNGSDEITHILSVLSSDSISFFSEWRSNLTIPAKEIKKVYVGDGPGGASDDGLGDISRSPLASESLLYSLEYAGKDLKLVRMAVPLRDTENENLLDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMFEEMGFKVDRSSSIYRRFRLRVLGKNYNSGVRIDSSRLGPDPGMPVSVASEVGAPRAGNNRSPTYRCKKCRRVVALKEHVVDHIPGEGETFGEWQKWRSDSLVDKYNESECSSIFIEPLQWMKAVEEGASEGKLNCAHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDASPQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0929 443 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 196 251 IPR000387 GO:0016311|GO:0016791
Mibi02g0929 443 CDD DSP_DUSP12 84 277 - -
Mibi02g0929 443 ProSiteProfiles Dual specificity protein phosphatase domain profile. 77 275 IPR020422 GO:0006470|GO:0008138
Mibi02g0929 443 Gene3D Protein tyrosine phosphatase superfamily 84 292 IPR029021 -
Mibi02g0929 443 FunFam Dual specificity protein phosphatase 12-like 84 292 - -
Mibi02g0929 443 Pfam Dual specificity phosphatase, catalytic domain 179 271 IPR000340 GO:0008138|GO:0016311
Mibi02g0929 443 SMART dsp_5 81 272 IPR020422 GO:0006470|GO:0008138
Mibi02g0929 443 ProSitePatterns Tyrosine specific protein phosphatases active site. 217 227 IPR016130 GO:0016311|GO:0016791
Mibi02g0929 443 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 81 440 - -
Mibi02g0929 443 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 83 275 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0929 Mibi-ChrMibi02 9151608 9158089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0929 180 271 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 4.53e-15 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0929 02 9151608 9158089 Mibi02g0929 02 9151608 9158089 ECH