Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0927 ATGGGACTCTGTCATGGAAAACCAATTGAAATCTCACAAACTCATGGAGAAAACCCATTATATCCTGATGATAAGGACGGGCTTCCAAAAATTCAAACCCCCAAATCCTCAAAGTTCCCCTTTTACAGCCCAAGTCCTTTACCAAGTCTGTTCAAGAACTCACCAGCAAATTCAAGTGTGAGCTCAACTCCTTTGCGCATTTTCAAACGCCCATTCCCTCCACCTTCACCTGCGAAGCACATTCGTGCATTGCTCGCTCGCCGACATAGTTCTGTGAAGCCAAACGAGGCATCCATCCCTGAAGGAGGCGAATGTGAGATTGGGTTGGATAAGAACTTCGGGTTTTCCAAGCAGTTCATAGCTCACTATGAACTTATGGAAGAGGTGGGTCGTGGCCACTTTGGGTATACTTGCTCTGCCAAGGGAAAAAAAGGCAGCTTGAAGGGGCTAGATGTGGCTGTCAAAGTCATTCCTAAATCCAAGATGACAACAGCAATTGCTATTGAGGATGTACGGAGAGAAGTCAGGATATTGCGGGTTCTTACAGGACACAAGAATCTAGTGCAATTCTATGAAGCCTACGAGGATGATGAAAATGTTTATATAGTCATGGAGTTGTGCAAAGGTGGTGAGCTGCTAGATAGGATTCTTTCCAGGGGCGGGAAGTACTCAGAAGAGGATGCCAAGGTTGTCATGATTCAGATATTGAGTGTGGTGGCCTTCTGTCATCTGCAGGGTGTGGTTCATCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGAAAACGCCACATTGAAAGCAATTGATTTTGGACTGTCTGACTATGTGAAGCCAGATGAGAGGTTGAATGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCATATGGGACAGAAGCAGACATGTGGAGCATAGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGGCCGTTTTGGGCTCGGACAGAATCAGGCATATTCCGTGCTGTCCTGAAGACAGATCCAAGTTTTGATGATGCTCCTTGGCCTTCTTTATCAGCTGATGCTATAGATTTTGTGAAGAGGCTGTTGAATAAGGATTATCGTAAAAGATTAACCGCATCTCAGGCTCTCTGTCATCCTTGGCTGGCTAATCATCATGATGACTTGAAGATACCTTTTGACATGATAATCATCAGACTTGTTAGAGCTTACATATCCTCGTCTTCTTTACGCAAATCAGCATTAGGGGCTATTGCAAAGACATTAACAGTACCTCAGTTAACATATCTCAGAGAACAATTTACACAGTTAGGGCCAAACAAGAGTGGATTTATTTCCATGCAGAACTTTAAGACGGCTGTTTCAAGGAACTCCACCGAGGCCACGAAGGATTCACGGGTCTTGGATTATGTGAGCATGGTTAGTTCTATGCAATACAGGAAATTAGATTTTGAGGAATTCTGTGCTGCTGCTATAAGCGTGCACCAGCTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGCGTGCTTATGAGTTGTTTGAAAAGGATGGAAATCGACCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCCTTCAGTACCTGTTCATGTGGTCCTCCAAGACTGGATAAGACACTCGGATGGAAAGCTCAGTTTCTTAGGATTTGTCAGACTTCTGCACGGACCTTCTTCCCGCACAATTCCGAAGGCATAA 1734 0.4412 MGLCHGKPIEISQTHGENPLYPDDKDGLPKIQTPKSSKFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHSSVKPNEASIPEGGECEIGLDKNFGFSKQFIAHYELMEEVGRGHFGYTCSAKGKKGSLKGLDVAVKVIPKSKMTTAIAIEDVRREVRILRVLTGHKNLVQFYEAYEDDENVYIVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENATLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDDAPWPSLSADAIDFVKRLLNKDYRKRLTASQALCHPWLANHHDDLKIPFDMIIIRLVRAYISSSSLRKSALGAIAKTLTVPQLTYLREQFTQLGPNKSGFISMQNFKTAVSRNSTEATKDSRVLDYVSMVSSMQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGPSSRTIPKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0927 577 CDD STKc_CAMK 122 384 - -
Mibi02g0927 577 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0927 577 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Mibi02g0927 577 MobiDBLite consensus disorder prediction 1 38 - -
Mibi02g0927 577 FunFam Calcium-dependent protein kinase SK5 295 390 - -
Mibi02g0927 577 Gene3D - 411 565 - -
Mibi02g0927 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 553 - -
Mibi02g0927 577 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Mibi02g0927 577 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0927 577 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0927 577 FunFam CDPK-related kinase 1 116 211 - -
Mibi02g0927 577 FunFam CDPK-related kinase 3 115 287 - -
Mibi02g0927 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Mibi02g0927 577 FunFam CDPK-related kinase 1 397 569 - -
Mibi02g0927 577 SUPERFAMILY Protein kinase-like (PK-like) 120 448 IPR011009 -
Mibi02g0927 577 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Mibi02g0927 577 Gene3D Transferase(Phosphotransferase) domain 1 213 406 - -
Mibi02g0927 577 SUPERFAMILY EF-hand 418 567 IPR011992 -
Mibi02g0927 577 Gene3D - 407 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0927 Mibi-ChrMibi02 9140602 9143940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0927 1 574 EF-hand Containing Proteins AT3G50530 65.873 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi02g0927 Pkinase 1.6e-69 CL0016