Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0918 ATGAATTCTGGGTCGTTAGATTACTGGAGGAGTTTCTTCCGAACGGCGAACTCTGATATATTTGATATTATCCACCATGCGATCATGGTAGCCGCTTCGGATTGTCCTAAGGAATTTCGATTGCGACGAGATGGAATTGCTGAACGGTTGTTTTCTTGTCGGATGACTCGTTGTTTGGGTTGTGAGCGAGTGGAGTTAGCGGTTTCCGGTGTTGGCGAGGAATACGAGGGAGGTTGCAAGAGTGATTTTGATAGACAAGAAGCTGAATTGGAAGCTGGTGCTAGTAAAGAGAGCAAGGCACATAGCTGTAGAGATGGCCGTGGAGAGATGAATATGAACCTACTTAGCAATTATAGCTATGGAGAAGCTGAAGCATTGACGGATGAGATTGAAGAAGAGTCTCAAATGGTTGATGAGATTTTGAGGATCAAGCAAATTCTTCATAACAACGAAGAAGAGTCTGATTCGGAATTATTTGAGTCATTGAGGAGGCTTCAGCTGATGGAACTGTCTGTGGATCTTCTAAAGGCGACTGAGATTGGAAAGGCTGTCAATCTTTTCCGAAAACATGGATCAAAGGAGATTCGTCAGCTTGCACGGACTCTTATTGAGGGCTGGAAAGAAATGGTAGATGAGTGGGTCAATGCTACCACATCCAATGCAGGTGCTGAAGGCACCCCAGATTCAGTAAATCCATCTGTTATTGATGAAGAGGAGGAAGAAGGGCTTCCATCACCTCCTATGGATGAGGGGGCTTTCTTTGCTGCTCAAACGGCGCCAATGGAATTATCACAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCGACAGAGTGGGGAATTCATCAAGAACCGGGAAAATAGCAGAAGACCAGCTCTGGACAATCAAAGCATAGTAAGGAGGAAACAACAGACTTCTGATGGGGTAGACACCATAGTCAAAGACAGCAAGAATCAGCAAACAAAGAAAATTGAGGCTGCTCCAAAGCTAAATAAATCGGCAACTGTTGGCTCTGGTCCTGGCAGACCATTAAAATCAAGCATGCAACGAAGAGAGAATGTGGAGCCAAGGATGTTGCAAAAGATGGACAGGAGTGGTGTCCCTAGGAGGCCTCCTGCTGGTCCGCAAGATAAGTCGAAGGGTTCTGATGATGCTTCAGTACAAATGAAGCTGGAGGCCACTAAGAGGAAACTTCAGGAGAGTTACCAACAAGCTGAAAATGCCAAGAAGCAACGAACAATCCAGGTTATGGAGTTGCATGATCTTCCCAAGCAAGCTGGGATTAACCACAGAAACACACATTTCAAACCTATGAAGAACCAAAACAGGAATTGGGCTCAGGGACGTTGGTAG 1356 0.4528 MNSGSLDYWRSFFRTANSDIFDIIHHAIMVAASDCPKEFRLRRDGIAERLFSCRMTRCLGCERVELAVSGVGEEYEGGCKSDFDRQEAELEAGASKESKAHSCRDGRGEMNMNLLSNYSYGEAEALTDEIEEESQMVDEILRIKQILHNNEEESDSELFESLRRLQLMELSVDLLKATEIGKAVNLFRKHGSKEIRQLARTLIEGWKEMVDEWVNATTSNAGAEGTPDSVNPSVIDEEEEEGLPSPPMDEGAFFAAQTAPMELSQFFDGMDDDGNPRQSGEFIKNRENSRRPALDNQSIVRRKQQTSDGVDTIVKDSKNQQTKKIEAAPKLNKSATVGSGPGRPLKSSMQRRENVEPRMLQKMDRSGVPRRPPAGPQDKSKGSDDASVQMKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQAGINHRNTHFKPMKNQNRNWAQGRW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0918 451 MobiDBLite consensus disorder prediction 384 404 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 430 451 - -
Mibi02g0918 451 Coils Coil 123 143 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 349 365 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 266 411 - -
Mibi02g0918 451 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 135 223 IPR035441 -
Mibi02g0918 451 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 128 224 IPR035441 -
Mibi02g0918 451 SMART TFS2_5 137 212 IPR003617 GO:0005634
Mibi02g0918 451 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 292 316 - -
Mibi02g0918 451 CDD TFIIS_I 138 211 - -
Mibi02g0918 451 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Mibi02g0918 451 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 438 IPR044805 -
Mibi02g0918 451 Coils Coil 389 416 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 218 251 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 435 451 - -
Mibi02g0918 451 MobiDBLite consensus disorder prediction 274 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0918 Mibi-ChrMibi02 8955020 8957506 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi02g0918 Med26 4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0918 02 8955020 8957506 Mibi02g0918 02 8955020 8957506 ECH