Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0915 ATGCCTTCGAAGGGAAAAAAGAATGCCAAGACACATTCGAGGCTATCCGCTTCTGAAGTGGCCTCTCCTCGTACACCATCACAGACTCCTAACAGAGATTCAGAAGTGAGTGAAGAAGAACTCATCCTTTCATGTGAAGAAGCTTCGAAAATGTTCCCGCCTTTCATTGGCAAATCTGCTTTTGTTGGCCATATCACTGCTGTGGACCTCAAATCCAAAGGCTGTAAAGTTTGGCTTTCTGAGTCTTCCATGGTTTCTTCTTCCCTTGCCCCTGGTACCGTTGTGTCGTTGTCAATTGCATCTTCAAGAAAGGCAAATCTGGATTCAGATAGCTTTCCTCTTAAATCGTTAACTAAAGAATGTGCTGGATGCTATGGACTGGATGCTGGGAACACTTCAGTTGAGGGCCCAGGAAACTACTTTGCTCTTGCAACAGTTTTTCCCTCTAGCAAGGTTTTGAAGAATGGAGTACAAATTTCACCAGAGCTTTCATATACCATGGGATGTCCTACTTTTGGCGCACACGTATTTGTTTATCCAGTGCAGAATCAATGCCTATCTTCTCTTGTAAATGATAAAAATGAACCACATTCTGTTGGAGATAATAGCCTGGTGGTTTATAATTGCAAGGAATTGTATCTTCAGTTGGCTCCTTTGAAGAATGGATTACCCATGAAAATCAGTAACATATCACTGATGGACTTGTCTGCAGCAAAATCCCATCTTCAATTTGGGAATGAAAATGTTGCTTCTCCTAAAACACCTTCTAATGGATTGAGATTGTCTAGTTTGAGTGATTTATCTTCACCTGTGTTTGAAGATTCTTCGTCAAGCGTTCCTAATCAAAAGTGCCAATCATTGACTTCATTTGATCTAAGGGAAGCGTTGGGGGATGAAAGCTCCAAAAAACTACTGCAGACATGTGCAGCGTCATGGTTGTATTCCCGTAGGTTACTACTAGGGAATATTGTGACCATACAAATATTTTCAGAGCTGTGCCTTTTCCAAGTATTAAGAGCTAAAAGTGTGTCAGTAGACCGATCTACTCCTGATTCATCAAGTGAAAGTAGTTCGTCATACCCAGGGGGTTCTGACATGTCGGAGCATATGAATCAGGCTATCATTGTCAATCATGAAACAAAGGTATCTTTATCTTTGCCATCAAATGTGACTTCTGATGAGCTGATTCAAAGAGATTTGTCTAAGGTGGAACTCAGGGAGAAGGGCACTAAGGCTAGTGTACCTAATAATATTTCAAAATTGGGTGGTCTTTCTAAAGAATATGCAGTTTTGAAGGATATAATTTTGTCTTCAGTAAAAAATGATCTATTGAGTAACTTTGGGTTACGAACTACGAAAGGCGTCCTCCTTCATGGTCCACCTGGCACAGGAAAGACTTCTCTAGCTCAATTATGTGCTCATGACGTGGGGGTGAATATTTTCCGGATAAATGGAGCTGAAGTTGTAGGCCAATATTATGGTGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCTGCTATTCAGGCTGCACCTGCTGTGGTATTTATTGATGAGTTGGATGCTATTGCCCCTGCAAGGAAAGATGGTGGTGATGAGCTTTCTCAGAGAATGGTTGCCACCTTATTGAATCTCATGGATGGAGTTTGTAGAACTGAAGGATTACTTGTTATTGCTGCCACCAACAGGCCTGACAATATTGAGCCTGCTCTGAGGCGGCCTGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCGTCTCCTCACCAAAGGTTCGATATGTTGCTCACTATTCTCAGTGATGTGGATCACACTCTTTCAGTGATACAGATTGAACATCTCGCCACAGTCACACATGGTTTTGTGGGTGCTGATTTAGTTGCCCTTTGCAAAGAGGCAGGCTTGGTATGTCTTAGGCGTTATTTTAATTTTAAGAAGGATTGGCATAATGGCTGCTATGATGGAACATCCTCACGATATAAAGGTCAGCAACCTGCATTGCCGAAAGGTGCAGAAGACTTGAGCGATCATTCTGGCCATTCCACTCCATCTGTTTCAGAGTTATCAGTGGCTTCAAACTCTTTGCTACCTTCTTGCATGATGGACGATATGGAAATAGTTCTTGATAGTGCTGAAGATATTAATTTGAAAGTAACTTATGAAGATTTTCAGAAGGCAAGAATGATAATAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAGGTTCCTAAGGTTAAGTGGGAGGATGTTGGTGGCCAAAATGATGTCAAAGCCCAACTGATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTGAAGCGTATTGGAACTCACCCCCCGAAAGGTGTGTTGATGTTTGGGCCTCCAGGTTGTAGCAAAACTCTTATGGCACGTGCAGTTGCTTCTGAAGCAGCATTGAACTTTCTGGCTGTCAAGGGTCCGGAACTCTTCAGCAAATGGGTGGGTGAATCTGAGAAGGCTGTCAGATCTTTGTTTGCAAAAGCAAGGGCCAATGCCCCATCTATTGTATTTTTTGATGAAATAGATGGCCTTGCTGTCACTCGGGGGAAGGAAAGTGATGGTGTTTCGGTGACAGATAGAGTCATGAGTCAACTTCTTGTTGAATTGGATGGCCTGCATGAAAGAGCTAATGTCACTGTCATTGCTGCTACAAATAGACCAGACAAGATTGATCCTGCCCTTTTGAGACCAGGACGCTTTGACCGTCTGCTGTATGTGGGACCTCCAAATGAGATGGACAGAGAAGAGATATTCCGCATCCATTTGCATAAAATTCCATGTGGTTCTGATGTAAGTCTAAAAGAACTGGCTTCTCTTACAGACGGCTGCACTGGTGCTGATATATCACTAGTATGCCGGGAGGCAGCTGTCGCAGCTATTGAGGAGAGCCTTGATGCTTCTGCAATAACAATGAAGCATTTGAAGACGGCAATTAAACAGGTCCATCCATCAGATATTCAGTCTTACCAACAGTTGTCAGCTAAATTTCAAAGGGCTGTAGGCACCTGTGATGTAAAACATGAGGGCAGAAATATGCAGTGCTCAAGCAGATCTACATGGCCCTTCATTGGGTAA 3102 0.4288 MPSKGKKNAKTHSRLSASEVASPRTPSQTPNRDSEVSEEELILSCEEASKMFPPFIGKSAFVGHITAVDLKSKGCKVWLSESSMVSSSLAPGTVVSLSIASSRKANLDSDSFPLKSLTKECAGCYGLDAGNTSVEGPGNYFALATVFPSSKVLKNGVQISPELSYTMGCPTFGAHVFVYPVQNQCLSSLVNDKNEPHSVGDNSLVVYNCKELYLQLAPLKNGLPMKISNISLMDLSAAKSHLQFGNENVASPKTPSNGLRLSSLSDLSSPVFEDSSSSVPNQKCQSLTSFDLREALGDESSKKLLQTCAASWLYSRRLLLGNIVTIQIFSELCLFQVLRAKSVSVDRSTPDSSSESSSSYPGGSDMSEHMNQAIIVNHETKVSLSLPSNVTSDELIQRDLSKVELREKGTKASVPNNISKLGGLSKEYAVLKDIILSSVKNDLLSNFGLRTTKGVLLHGPPGTGKTSLAQLCAHDVGVNIFRINGAEVVGQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGDELSQRMVATLLNLMDGVCRTEGLLVIAATNRPDNIEPALRRPGRFDKEIEIGVPSPHQRFDMLLTILSDVDHTLSVIQIEHLATVTHGFVGADLVALCKEAGLVCLRRYFNFKKDWHNGCYDGTSSRYKGQQPALPKGAEDLSDHSGHSTPSVSELSVASNSLLPSCMMDDMEIVLDSAEDINLKVTYEDFQKARMIIRPSAMREVILEVPKVKWEDVGGQNDVKAQLMEAVEWPQKHHDALKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAALNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVTDRVMSQLLVELDGLHERANVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEMDREEIFRIHLHKIPCGSDVSLKELASLTDGCTGADISLVCREAAVAAIEESLDASAITMKHLKTAIKQVHPSDIQSYQQLSAKFQRAVGTCDVKHEGRNMQCSSRSTWPFIG 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0915 1033 Gene3D - 746 993 IPR027417 -
Mibi02g0915 1033 MobiDBLite consensus disorder prediction 346 365 - -
Mibi02g0915 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 640 IPR027417 -
Mibi02g0915 1033 CDD AAA 770 917 - -
Mibi02g0915 1033 SMART AAA_5 451 587 IPR003593 -
Mibi02g0915 1033 SMART AAA_5 781 919 IPR003593 -
Mibi02g0915 1033 Pfam ATPase family associated with various cellular activities (AAA) 455 584 IPR003959 GO:0005524|GO:0016887
Mibi02g0915 1033 Pfam ATPase family associated with various cellular activities (AAA) 785 916 IPR003959 GO:0005524|GO:0016887
Mibi02g0915 1033 Gene3D - 398 584 IPR027417 -
Mibi02g0915 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 743 995 IPR027417 -
Mibi02g0915 1033 ProSitePatterns AAA-protein family signature. 887 905 IPR003960 GO:0005524|GO:0016887
Mibi02g0915 1033 FunFam spermatogenesis-associated protein 5-like protein 1 918 1000 - -
Mibi02g0915 1033 MobiDBLite consensus disorder prediction 659 686 - -
Mibi02g0915 1033 PANTHER AAA-FAMILY ATPASE 80 1006 - -
Mibi02g0915 1033 FunFam Calmodulin-interacting protein 111 586 745 - -
Mibi02g0915 1033 FunFam calmodulin-interacting protein 111 isoform X1 742 917 - -
Mibi02g0915 1033 FunFam Putative vesicular transport protein (CDC48) 405 584 - -
Mibi02g0915 1033 MobiDBLite consensus disorder prediction 1 39 - -
Mibi02g0915 1033 Gene3D - 918 988 - -
Mibi02g0915 1033 MobiDBLite consensus disorder prediction 14 32 - -
Mibi02g0915 1033 Pfam AAA+ lid domain 610 642 IPR041569 -
Mibi02g0915 1033 Pfam AAA+ lid domain 939 984 IPR041569 -
Mibi02g0915 1033 Gene3D - 586 745 - -
Mibi02g0915 1033 CDD AAA 439 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0915 Mibi-ChrMibi02 8919288 8926891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0915 1 1029 Calmodulin-binding Proteins AT3G56690 56.898 0.0 1043