Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0913 ATGAGGGAAGATGACTCCAATTGGTTCTCACGATGGGAAGAGGAACTTCCTTCTCCGGACGAACTCATGCCTCTCTCTCAAACCCTAATAACTCCCGATCTTGCTTTGGCTTTTGATATCCGAAACCATCATCACCTCAATACCTCACAACAACAAATCCCTCAGCCACCTCCTCCCTCAAATCCCCTGCCTTCACCTGGCAATCCCACTCACCCTACCTCCGCCGATTTCGCAGATTCCGGTGAATTGGGCTCCGGAATCGGCGGCGATGAACCCGCCAGAACCCTCAAGCGCCCTCGCCTTGTGTGGACCCCTCAACTTCACAAGAGATTTGTGGACGCTGTGGCTCACTTGGGGATTAAGAATGCTGTCCCCAAGACTATAATGCAGTTGATGAGTGTCGATGGCTTGACCAGAGAGAACGTCGCCAGCCACTTGCAAAAATACCGCCTTTACCTCAAGCGCATGCAGGGATTATCCGCCGGCGGCGGCGGCGGAGGTAGCGGCGGAGGAGGCGGCGGTTCGTTGGCCGCCTCCGCCGATCCGGCGACCGATCATTTGTTCGCTAGCTCGCCGGTTCCGCCGCATTTCTTGCATCCGACAAGGCCTAATTCGGATCATTTCTTGCCGTTTGTGCCGGTCCAGACTCTGCAGCAGCACCACCATCAGCACATGGCGGCGGCTGCGGCGGCGGCGGCGGGGCATCCGCAGTTTCATAGGCAGGTGGGGCATTTTGGGTCACCGCCAAATGGGCACTTTGAGCATCATCCCTTTCTAGCTAGGCAGACTCAGGCTCAGGCAATTCACAGGATGGGTGCCCCAATGCATAATAATTCAGTGGCTGCTAATTATGTGGAGGATATGGAATCGGCTAATGCCGCAGGAGGGAGAAAGGTTCTTACTTTATTCCCCACTGGGGATGATTGA 927 0.5556 MREDDSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIRNHHHLNTSQQQIPQPPPPSNPLPSPGNPTHPTSADFADSGELGSGIGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGSGGGGGGSLAASADPATDHLFASSPVPPHFLHPTRPNSDHFLPFVPVQTLQQHHHQHMAAAAAAAAGHPQFHRQVGHFGSPPNGHFEHHPFLARQTQAQAIHRMGAPMHNNSVAANYVEDMESANAAGGRKVLTLFPTGDD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0913 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Mibi02g0913 308 SUPERFAMILY Homeodomain-like 95 155 IPR009057 -
Mibi02g0913 308 Gene3D - 95 157 - -
Mibi02g0913 308 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 284 IPR044841 GO:0003700|GO:0006355
Mibi02g0913 308 MobiDBLite consensus disorder prediction 47 93 - -
Mibi02g0913 308 MobiDBLite consensus disorder prediction 52 69 - -
Mibi02g0913 308 FunFam Two-component response regulator 94 157 - -
Mibi02g0913 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 154 IPR017930 -
Mibi02g0913 308 Pfam Myb-like DNA-binding domain 102 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0913 Mibi-ChrMibi02 8912887 8913813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0913 1 308 G2-like Transcription Factor Family AT3G10760 59.669 3.90e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi02g0913 Myb_DNA-binding 2.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0913 02 8912887 8913813 Mibi02g0913 02 8912887 8913813 ECH