Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0905 ATGGCTTTAGAGATTATGGCGCCCAACACTTGCGTTAGGGGTTGTTGTACCAGCCCTTCTATTCCTCTTCATCTTCCTCCTTCCTCCTATTCTCTTTTATCTCCAATTGCCAAAGGGGCGGAGAGTGTTGTTTACGAAGGGACTTTAGATGGTAACAAGGTTGCTGTCAAGAAACCTATCCTGTCAACTACCGAGGATATTAACAAGTTCCACAAAGAATTACAGCTTTTGTGCAAGTTAGATCACCCGGGGATAGCAACACTGATTGCTGCCCATGCAAAGCCTCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAAGTTACACTTGGAAGAATGGACCCCGAGTATCAATCATGCACTTATGATAATAATTCAGTTAGCCAAAGCTTTGCAGTATCTTCATAGCCTTGGGATATTACATAGAGATGTGAAACCAGCAAATATTCTACTCGACGAAAACCTTTATCCACACCTCACAGATTTTGGTTTGGCAGAATTCAAGAATAACCTTAAGAGTGTTTCTCTTGAAAATTGGAAATCTTCTGGCAAGCCCACTGGTGGTTTTCATAAGAAAAATATGGTTGGAACTCTAATATACATGGCACCTGAAATATTAAGGAAGGAATTGCACACTGAAAAATCAGACGTCTACAGTTTTGGGGTGACAATCAATGAACTCCTTACAGGTGTTGTACCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTGCTGGAGATGAACTATACAGAGCAGCAATTAACTGCAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGAGTCTGGTGTACCTTCAAGATTATTAGCATTAATACAAAGATGCTGGGATGCAAAACCTGAAAATAGACCTTCCTTTGATGATATAATTAAGGAGCTTGATTCCATCAATGAGAATGCTTTGGACGTTGATGATAGACAACTCAGACCTATTAAGTTTCATGATAATCAGGTTGTAGATGGGAGTAATAATCACCTTCAGGCTTATCAAGAGAGTGTTAACTGGTCTACCCTGGGAGAACTTTTCTCAAAGAGATCGTCCAGTGCAACTGATTCTAAACTGAGAACCTGGCATAGGTCTTTTGATGAGCCTTTGGCTCACTGTCCAACACTTTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGTCTATGGAGGACACACATTTCATTCTTCCCAGCATATGCAGTGAAAAGGACATACATGCTTTCGGTATCTTTGATGGCCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCTAAAGTCATGCCAGGATTTCTGCAAGCTTTAGGTTCTATAGGAAGTCCAGCTACCACACTCGTCCAGGCATTCATTAAAACAGATGTTGCTTTCAGAGAGGAGCTCAATTCCTGTCGTAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCGGGTTGCACGGCAGTTACCGCTCTTGTCGTAAGAAACAAGCTTTTTGTTGCTAACAGTGGTGATTGCAGGACAATCTTATGCCGAGCTGGTTCTCCCATTGCTCTAACCAAAGATCATGTTGCAAGCTGTCCTGCAGAGAGAGAACGTGTTATTCGTGATGGAGGGGAAGTTCACTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTTCAGGTTACTCGTTCCATTGGGGATGATGATCTTAAGCCGGCTGTAACTGCAGAACCGGAGATAACTGAAACTACTTTATCTGCAGATGACGAATTTTTGGTGATGGCAAGTGATGGACTGTGGGATGTGATGAGCAATAAAGAAGTGATAAGCATAATCAAAGATACAGTGAAAGAGGCAGGAATGTGCTCAAAGAGGTTGGCTACTGAGGCCGTGGAACGAGGGAGTAAAGACAATATCACAGTCATTGTGGTTTTCTTGCGCCCTGTCTCTACGGCAGAGAGAATTTATTAG 1974 0.4306 MALEIMAPNTCVRGCCTSPSIPLHLPPSSYSLLSPIAKGAESVVYEGTLDGNKVAVKKPILSTTEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYLFFFKFYESLNLAQKLHLEEWTPSINHALMIIIQLAKALQYLHSLGILHRDVKPANILLDENLYPHLTDFGLAEFKNNLKSVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQESGVPSRLLALIQRCWDAKPENRPSFDDIIKELDSINENALDVDDRQLRPIKFHDNQVVDGSNNHLQAYQESVNWSTLGELFSKRSSSATDSKLRTWHRSFDEPLAHCPTLSWGSYATCGRRESMEDTHFILPSICSEKDIHAFGIFDGHRGAAAAEFSAKVMPGFLQALGSIGSPATTLVQAFIKTDVAFREELNSCRKSRRVTQKDWHPGCTAVTALVVRNKLFVANSGDCRTILCRAGSPIALTKDHVASCPAERERVIRDGGEVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLSADDEFLVMASDGLWDVMSNKEVISIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0905 657 Gene3D Transferase(Phosphotransferase) domain 1 22 341 - -
Mibi02g0905 657 Gene3D - 384 652 IPR036457 -
Mibi02g0905 657 SMART PP2C_4 380 645 IPR001932 -
Mibi02g0905 657 Pfam Protein phosphatase 2C 395 640 IPR001932 -
Mibi02g0905 657 CDD PP2Cc 392 647 IPR001932 -
Mibi02g0905 657 SUPERFAMILY PP2C-like 383 649 IPR036457 -
Mibi02g0905 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mibi02g0905 657 Pfam Protein kinase domain 31 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0905 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 317 - -
Mibi02g0905 657 SUPERFAMILY Protein kinase-like (PK-like) 23 335 IPR011009 -
Mibi02g0905 657 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0905 657 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 651 - -
Mibi02g0905 657 SMART serkin_6 30 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g0905 657 SMART PP2C_SIG_2 405 647 IPR001932 -
Mibi02g0905 657 ProSiteProfiles PPM-type phosphatase domain profile. 390 647 IPR001932 -
Mibi02g0905 657 FunFam Protein kinase and PP2C-like domain-containing protein 20 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0905 Mibi-ChrMibi02 8807615 8812300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0905 99 657 PP2C-type Phosphatase Gene Family AT2G40860 66.132 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Mibi02g0905 Pkinase 1.9e-46 CL0016