Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0904 ATGTCAGACAGAGTAACCATAGGCGCTGCTTACGACAGAAAGTTTAAGCGAAAAATGTGTAAGGAGTCATCGGAGCTGCCGGCAACGCCCACCATGAACACCGCCACCGAAGGCGAATCGGAGGGGATTCTGACTCTGAAGCTGATGGTGGGCCCACCAAATAATGAGGCCGAAGCTGAGGCATCAAATAACAGCCAAGAGGTAGCAACAAATAATAATAACAATAATAATAGGGAGATGAAATTTAGTTGCAAATATTGTGACAAGAAGTTCCGTACATCTCAGGCTTTGGGTGGTCACCAAAATGCCCACAGACGTGAGCGTGTGATCAGAAAAATTGAGAAAGAGTTTGGTTTGGGCACTTTTGGACACTTTGGTCCTTTTTGTCCTTACCCATATATGGCTAATCTTCCCTTTGTTGGGTCACCTCTTTTTGGTGGCCTTCACCATCACCCTATGAACCCAATGGGTCATTGTGGCTTCCAAGGCCCACCCAACTCGGCCCTCGAAGCCATCCGGTTCGGCTCGAGAAGCTCGTGGGCTGCCACCAAAGACGATGACGGAGCGGTTCAACGCAGATCAGCGAACCGGAGAAGCCATGGTCAGAGTTCTTCCCTTGAGAACACAAAGCCAGATGAACCAGAAAGTGCAAGTGTCAGTGCTAGAAAACTTGAGACGAACACGAGTATGGGAAGCGACGAGGATACACCATCAGACATTGACTTGTCTCTCCATCTTTAA 741 0.4845 MSDRVTIGAAYDRKFKRKMCKESSELPATPTMNTATEGESEGILTLKLMVGPPNNEAEAEASNNSQEVATNNNNNNNREMKFSCKYCDKKFRTSQALGGHQNAHRRERVIRKIEKEFGLGTFGHFGPFCPYPYMANLPFVGSPLFGGLHHHPMNPMGHCGFQGPPNSALEAIRFGSRSSWAATKDDDGAVQRRSANRRSHGQSSSLENTKPDEPESASVSARKLETNTSMGSDEDTPSDIDLSLHL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0904 246 MobiDBLite consensus disorder prediction 180 246 - -
Mibi02g0904 246 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Mibi02g0904 246 MobiDBLite consensus disorder prediction 195 236 - -
Mibi02g0904 246 SUPERFAMILY beta-beta-alpha zinc fingers 79 109 IPR036236 -
Mibi02g0904 246 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 62 246 IPR044246 GO:0009788
Mibi02g0904 246 Gene3D Classic Zinc Finger 58 117 - -
Mibi02g0904 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Mibi02g0904 246 MobiDBLite consensus disorder prediction 54 76 - -
Mibi02g0904 246 Pfam C2H2-type zinc finger 82 107 - -
Mibi02g0904 246 MobiDBLite consensus disorder prediction 57 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0904 Mibi-ChrMibi02 8803671 8804411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0904 82 142 C2H2 Transcription Factor Family AT1G80730 45.714 3.65e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g0904 zf-C2H2_6 1.5e-06 CL0361