Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0899 ATGTCAAATAGCAGGAACACTCATTGGTGTTATAGTTGCAGGAGGCCAGTTCAGCTGCGAGGGCGAGATGTGGTTTGCCCTAATTGTAATGAGGGATTTATTCAAGAACTTAATGATATGGTTATCAATCCACTTGACTTCTTTGGATTAGACAATGTTGAAGAACGTGACCGGAGGTTCAGAATTATGGAAGCCTTCTCTACCTTTATGAGGCATCGACCAGTAAATAGAAGCCATAGGCATGACATCATAGTTGGATCAGATTCAATTCCTGAACATGGTCCAGGGTATGCTCCTTTGCTGCTCTTTGGTGGCCAGATTCCTGTCAGATTGTCTGGACACGGTGGCTTCGAAGCTCTTTTCAATGGAGCTCCTGGAATCGGACTAATGCAAGGCAATACAGGTGATTATTTTATTGGTCCCGGACTGGAAGAACTGTTTGAACAGCTTTCAGCTAATGACAGGCGAGGTCCTCCTCCAGCTTCCAGGTCCTCAATAGACGCAATGCCTACTATTAAGATCACACATAAGCTTCTTCGTTCAGACTCTCATTGTCCGGTATGCCAAGATAAATTTGAGCTGGGGTCTGAAGCAAGGCAAATGCCATGTAAACACATATATCACTCAGATTGTATTGTTCCTTGGTTGGTACAGCATAACTCCTGCCCTGTTTGTCGCCAGGAGTTACCACCTCAAGGATTGAGCAGCAACCGTGGCTCCAATAGTAGAACTAGGAGCAGTTCTGATAGTCATAGCGGAAATGGAAGGGTGAATGGTAGAGAGAACCAGGGAAGGCGGAACCCATTCTCCAATTTTTGGCCTTTCCGTTCATCTAATTCTGGTAACAATGGAGCAGGAGGAAGCAGCTCACGAACACAGCCTATCCCTGAGAATAGCCATCATACAGGCTATTCTGGATGGCCATTTGAGTAA 933 0.4544 MSNSRNTHWCYSCRRPVQLRGRDVVCPNCNEGFIQELNDMVINPLDFFGLDNVEERDRRFRIMEAFSTFMRHRPVNRSHRHDIIVGSDSIPEHGPGYAPLLLFGGQIPVRLSGHGGFEALFNGAPGIGLMQGNTGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPTIKITHKLLRSDSHCPVCQDKFELGSEARQMPCKHIYHSDCIVPWLVQHNSCPVCRQELPPQGLSSNRGSNSRTRSSSDSHSGNGRVNGRENQGRRNPFSNFWPFRSSNSGNNGAGGSSSRTQPIPENSHHTGYSGWPFE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0899 310 SMART ring_2 185 225 IPR001841 -
Mibi02g0899 310 CDD RING-H2_RNF126_like 185 226 - -
Mibi02g0899 310 Pfam Ring finger domain 184 226 IPR001841 -
Mibi02g0899 310 Pfam zinc-ribbon 6 37 IPR039525 GO:0061630
Mibi02g0899 310 MobiDBLite consensus disorder prediction 230 300 - -
Mibi02g0899 310 FunFam E3 ubiquitin-protein ligase RING1-like 148 232 - -
Mibi02g0899 310 MobiDBLite consensus disorder prediction 230 310 - -
Mibi02g0899 310 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Mibi02g0899 310 SUPERFAMILY RING/U-box 165 232 - -
Mibi02g0899 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 147 232 IPR013083 -
Mibi02g0899 310 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 90 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0899 Mibi-ChrMibi02 8734237 8735169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0899 120 230 C3H Transcription Factor Family AT5G01980 42.609 8.62e-26 105