Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g0888 ATGGAACAACATCCCCTTTTGCCCACTGACGATCTTCGTCGCTCTCGCGGGAGTAGTAATCCCATGCTTCGCGCCTCCACTTTACGCGCCACTTTCACCCTCCCCTTGACTCGCTACACCACCCGTCTGATTGCGGCGGAGCATCACCGGATTTTGCTCGGTGATTGTACGGAGAACCCATCTGAGGACGATGACGATAGGCCCCTTGATGATAATAGTTGCGCCTATTCGAGGCCCATTTTGGTTTTGGACCTTGTGTGGAACCTGGCTTTTGTACTGGTCACTGCTGGCGTGCTTCTTTCCACTTTTAGCGAGCATCCGTCTACCCCTTTGAGGCTTTGGCTATGTGGGTATGCCTTTGAGTGTGTTCTGCATATGGGTTTTGTGTGTTTTGAGTATTGGCGGAGGACTCGAGATTTTTATGGTCCTGAGCTTGGGCTTCCGTTTTCCCAGAGTTGGAACAGCAAAGTGAAGAAGTTGGAGTCTATGAACACACTGGTATCATCTGTTTGGTGGGTCCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAACTTTTGCAAGACTGTCCTCGTATCTACTGGTTAACAGTGGTCTTTCTAGCCTTTGATGTGTTTTTTATTATCTTTTGCATTGGGATGGTATGTATAGTTTTCTTTGCTCTCTTCTTCTTCATCCCGGTAGTAGCATTAGCTTATGCTATGAGAATCAGAGAAGGTGCATCAGAAGCGGATATCAGGTCACTTCCAAAGTATAAGTTTAGCCAGTCAAATTCGTTGGTGATGGTTGACGACAGTAATAAGCAAGTTTCTCAAGCAAGAATGGGCGCAAGCAATAGCAATAGCAACCTTGTCAGTGAATTATATCTCAACCCAGATGATTCTGAATGCTGCATCTGCCTTTCTCCATACGTTGAAGGGGCAGAACTTTATCGCCTTCCCTGCACACACCATTTTCATTGTGGTTGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCTCTCTGCAAATTTAATATTCTTAGAAGTGATACATTGGTTTGA 1047 0.4642 MEQHPLLPTDDLRRSRGSSNPMLRASTLRATFTLPLTRYTTRLIAAEHHRILLGDCTENPSEDDDDRPLDDNSCAYSRPILVLDLVWNLAFVLVTAGVLLSTFSEHPSTPLRLWLCGYAFECVLHMGFVCFEYWRRTRDFYGPELGLPFSQSWNSKVKKLESMNTLVSSVWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCIGMVCIVFFALFFFIPVVALAYAMRIREGASEADIRSLPKYKFSQSNSLVMVDDSNKQVSQARMGASNSNSNLVSELYLNPDDSECCICLSPYVEGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRSDTLV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g0888 348 ProSiteProfiles Zinc finger RING-type profile. 297 338 IPR001841 -
Mibi02g0888 348 Pfam Ring finger domain 296 338 IPR001841 -
Mibi02g0888 348 SMART ring_2 297 337 IPR001841 -
Mibi02g0888 348 SUPERFAMILY RING/U-box 289 343 - -
Mibi02g0888 348 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 344 IPR013083 -
Mibi02g0888 348 PANTHER TARGET OF ERK KINASE MPK-1 70 342 - -
Mibi02g0888 348 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g0888 Mibi-ChrMibi02 8638818 8641891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g0888 18 345 C3H Transcription Factor Family AT1G68070 40.816 5.98e-86 261